Item | Value |
---|---|
RNA id | XM_026938116.2 |
length | 1364 |
RNA type | mRNA |
GC content | 0.61 |
exon number | 5 |
gene id | arxa |
representative | False |
Item | Value |
---|---|
chromosome id | NC_047616.1 |
NCBI id | CM018562.1 |
chromosome length | 21037487 |
location | 19429768 ~ 19436760 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
id | name | namespace |
---|---|---|
GO:0021539 | subthalamus development | biological_process |
GO:0006355 | regulation of transcription, DNA-templated | biological_process |
GO:0048666 | neuron development | biological_process |
GO:0005634 | nucleus | cellular_component |
GO:0043565 | sequence-specific DNA binding | molecular_function |
GO:0003700 | DNA-binding transcription factor activity | molecular_function |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU396394 | lncRNA | upstream | 69031 | 19317857 ~ 19360737 (+) | False | dap |
TU396400 | lncRNA | upstream | 69031 | 19317857 ~ 19360737 (+) | False | dap |
TU396406 | lncRNA | upstream | 78016 | 19345889 ~ 19351752 (+) | True | G334733 |
TU396221 | lncRNA | upstream | 496517 | 18933049 ~ 18933251 (+) | True | G334575 |
TU396219 | lncRNA | upstream | 497058 | 18932502 ~ 18932710 (+) | True | G334573 |
XR_004576958.1 | lncRNA | downstream | 85818 | 19521365 ~ 19522260 (+) | True | LOC117595782 |
TU396487 | lncRNA | downstream | 125555 | 19561102 ~ 19589060 (+) | True | G334806 |
TU396561 | lncRNA | downstream | 201321 | 19636868 ~ 19703804 (+) | False | cip2a |
TU396588 | lncRNA | downstream | 269138 | 19704685 ~ 19707006 (+) | True | G334888 |
TU396939 | lncRNA | downstream | 330923 | 19766470 ~ 19766826 (+) | True | G335214 |
XM_026938081.2 | mRNA | upstream | 33878 | 19391973 ~ 19395890 (+) | True | ndufb4 |
XM_026938102.2 | mRNA | upstream | 69031 | 19339176 ~ 19360737 (+) | True | dap |
XM_034298163.1 | mRNA | upstream | 73171 | 19339166 ~ 19356597 (+) | False | dap |
XM_034298229.1 | mRNA | upstream | 93118 | 19335026 ~ 19336650 (+) | True | LOC117595802 |
XM_034297842.1 | mRNA | upstream | 94488 | 19332174 ~ 19335280 (+) | True | LOC117595764 |
XM_026938288.2 | mRNA | downstream | 62755 | 19498302 ~ 19506536 (+) | False | pcyt1ba |
XM_026938285.2 | mRNA | downstream | 62756 | 19498303 ~ 19506536 (+) | True | pcyt1ba |
XM_034298283.1 | mRNA | downstream | 143763 | 19579310 ~ 19593452 (+) | True | mtmr6 |
XM_026937824.2 | mRNA | downstream | 165018 | 19600565 ~ 19603770 (+) | True | amer2 |
XM_026938183.2 | mRNA | downstream | 242957 | 19678504 ~ 19683656 (+) | False | si:ch73-264p11.1 |
TU396392 | other | upstream | 1832 | 19339206 ~ 19427936 (+) | False | dap |
TU396524 | other | downstream | 140564 | 19576111 ~ 19577073 (+) | True | G334838 |
TU396585 | other | downstream | 242934 | 19678481 ~ 19683870 (+) | True | si:ch73-264p11.1 |
TU396584 | other | downstream | 244450 | 19679997 ~ 19683870 (+) | False | si:ch73-264p11.1 |
TU396960 | other | downstream | 353036 | 19788583 ~ 19789058 (+) | True | G335231 |
TU397154 | other | downstream | 724853 | 20160400 ~ 20163106 (+) | False | ccl20b |