Item | Value |
---|---|
RNA id | XM_026938141.2 |
length | 1522 |
RNA type | mRNA |
GC content | 0.42 |
exon number | 2 |
gene id | urad |
representative | False |
Item | Value |
---|---|
chromosome id | NC_047616.1 |
NCBI id | CM018562.1 |
chromosome length | 21037487 |
location | 17432046 ~ 17434825 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
id | name | namespace |
---|---|---|
GO:0006144 | purine nucleobase metabolic process | biological_process |
GO:0019628 | urate catabolic process | biological_process |
GO:0019428 | allantoin biosynthetic process | biological_process |
GO:0005777 | peroxisome | cellular_component |
GO:0016831 | carboxy-lyase activity | molecular_function |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU395018 | lncRNA | upstream | 69709 | 17362871 ~ 17363075 (+) | True | G333548 |
TU394762 | lncRNA | upstream | 246109 | 17186129 ~ 17186675 (+) | True | G333360 |
TU394629 | lncRNA | upstream | 534929 | 16893006 ~ 16897855 (+) | True | G333244 |
XR_003404172.2 | lncRNA | upstream | 542623 | 16888937 ~ 16890161 (+) | True | LOC113541357 |
TU394631 | lncRNA | upstream | 543055 | 16888906 ~ 16889729 (+) | False | LOC113541357 |
TU395063 | lncRNA | downstream | 11360 | 17446185 ~ 17447043 (+) | True | G333582 |
TU395113 | lncRNA | downstream | 105812 | 17540637 ~ 17541761 (+) | False | rnf6 |
TU395303 | lncRNA | downstream | 232811 | 17667636 ~ 17667844 (+) | True | G333787 |
TU395307 | lncRNA | downstream | 235591 | 17670416 ~ 17670625 (+) | True | G333791 |
TU395294 | lncRNA | downstream | 272897 | 17707722 ~ 17712380 (+) | True | G333779 |
XM_026938210.2 | mRNA | upstream | 42145 | 17378301 ~ 17390639 (+) | True | ccdc191 |
XM_034298218.1 | mRNA | upstream | 42145 | 17378301 ~ 17390639 (+) | False | ccdc191 |
XM_034298150.1 | mRNA | upstream | 79475 | 17336192 ~ 17353309 (+) | True | drd3 |
XM_026938106.2 | mRNA | upstream | 79475 | 17336192 ~ 17353309 (+) | False | drd3 |
XM_026938246.2 | mRNA | upstream | 99275 | 17329834 ~ 17333509 (+) | True | si:ch211-161h7.8 |
XM_026937820.2 | mRNA | downstream | 15898 | 17450723 ~ 17466452 (+) | False | lnx2a |
XM_026937819.2 | mRNA | downstream | 17339 | 17452164 ~ 17466452 (+) | True | lnx2a |
XM_026938072.2 | mRNA | downstream | 48868 | 17483693 ~ 17492318 (+) | True | usp12a |
XM_034298075.1 | mRNA | downstream | 61252 | 17496077 ~ 17503703 (+) | True | gpr12 |
XM_026938240.2 | mRNA | downstream | 101119 | 17535944 ~ 17542387 (+) | False | rnf6 |
TU394792 | other | upstream | 130780 | 17287160 ~ 17302004 (+) | False | G333388 |
TU394795 | other | upstream | 131087 | 17292031 ~ 17301697 (+) | False | G333388 |
TU394798 | other | upstream | 132773 | 17285082 ~ 17300011 (+) | True | G333388 |
TU394801 | other | upstream | 132773 | 17287160 ~ 17300011 (+) | False | G333388 |
TU394797 | other | upstream | 137730 | 17287160 ~ 17295054 (+) | False | G333388 |
TU395491 | other | downstream | 551937 | 17986762 ~ 17993014 (+) | True | G333943 |
XR_004576961.1 | other | downstream | 880531 | 18315356 ~ 18323295 (+) | False | mtfr1 |
XR_004576962.1 | other | downstream | 880533 | 18315358 ~ 18323295 (+) | False | mtfr1 |
XR_004576959.1 | other | downstream | 880535 | 18315360 ~ 18323295 (+) | False | mtfr1 |
XR_004576960.1 | other | downstream | 880858 | 18315683 ~ 18323295 (+) | True | mtfr1 |