Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026938148.2 |
| length | 1320 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 5 |
| gene id | msrb2 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 13336338 ~ 13341661 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0030041 | actin filament polymerization | biological_process |
| GO:0005739 | mitochondrion | cellular_component |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0033743 | peptide-methionine (R)-S-oxide reductase activity | molecular_function |
| GO:0003779 | actin binding | molecular_function |
| id | description |
|---|---|
| K07305 | msrB; peptide-methionine (R)-S-oxide reductase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU392561 | lncRNA | upstream | 45939 | 13287447 ~ 13290399 (+) | True | G331468 |
| TU392580 | lncRNA | upstream | 61927 | 13274127 ~ 13274411 (+) | True | G331487 |
| TU392579 | lncRNA | upstream | 62297 | 13273743 ~ 13274041 (+) | True | G331486 |
| TU392575 | lncRNA | upstream | 66696 | 13269427 ~ 13269642 (+) | True | G331482 |
| TU392573 | lncRNA | upstream | 71752 | 13264349 ~ 13264586 (+) | True | G331480 |
| TU392595 | lncRNA | downstream | 18619 | 13360280 ~ 13361018 (+) | True | G331498 |
| TU392593 | lncRNA | downstream | 19708 | 13361369 ~ 13362702 (+) | True | G331496 |
| TU392599 | lncRNA | downstream | 38983 | 13380644 ~ 13382636 (+) | True | G331502 |
| XR_004576995.1 | lncRNA | downstream | 616363 | 13958024 ~ 13962184 (+) | True | LOC117595809 |
| TU393268 | lncRNA | downstream | 1346502 | 14688163 ~ 14703270 (+) | True | G332111 |
| XM_026938109.2 | mRNA | upstream | 1813 | 13322337 ~ 13334525 (+) | True | armc3 |
| XM_026937922.2 | mRNA | upstream | 58313 | 13274660 ~ 13278025 (+) | True | skida1 |
| XM_026938128.2 | mRNA | upstream | 293822 | 13021167 ~ 13042516 (+) | True | cul1b |
| XM_026938097.2 | mRNA | upstream | 321229 | 12766560 ~ 13015109 (+) | True | LOC113541231 |
| XM_034298168.1 | mRNA | upstream | 623687 | 12710626 ~ 12712651 (+) | True | ccl34b.4 |
| XM_026938165.2 | mRNA | downstream | 2085 | 13343746 ~ 13350216 (+) | True | c8g |
| XM_026938162.2 | mRNA | downstream | 31903 | 13373564 ~ 13379652 (+) | True | klhl15 |
| XM_034298205.1 | mRNA | downstream | 32153 | 13373814 ~ 13379652 (+) | False | klhl15 |
| XM_026938163.2 | mRNA | downstream | 32217 | 13373878 ~ 13379652 (+) | False | klhl15 |
| XM_026937943.2 | mRNA | downstream | 44413 | 13386074 ~ 13396461 (+) | True | cmbl |
| TU392569 | other | upstream | 77922 | 13257894 ~ 13258416 (+) | True | G331476 |
| TU392341 | other | upstream | 623660 | 12706939 ~ 12712678 (+) | True | G331263 |
| XR_003404147.2 | other | upstream | 1179551 | 12062332 ~ 12156787 (+) | True | prkag2a |
| TU391847 | other | upstream | 1587779 | 11738158 ~ 11748559 (+) | True | ankha |
| TU391206 | other | upstream | 2361423 | 10973264 ~ 10974915 (+) | True | G330257 |
| trnat-agu_17 | other | downstream | 43540 | 13385201 ~ 13385274 (+) | True | trnat-agu_17 |
| XR_004576981.1 | other | downstream | 1909974 | 15251635 ~ 15264587 (+) | False | si:ch73-173p19.2 |
| TU393912 | other | downstream | 2224514 | 15566175 ~ 15566663 (+) | True | G332636 |
| TU394735 | other | downstream | 3765811 | 17107472 ~ 17110027 (+) | False | hhatlb |
| TU394736 | other | downstream | 3765811 | 17107472 ~ 17110027 (+) | False | hhatlb |
