Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026938225.2 |
| length | 914 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 5 |
| gene id | dnajc5b |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 18372722 ~ 18378196 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | description |
|---|---|
| K09525 | DNAJC5; DnaJ homolog subfamily C member 5 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU395716 | lncRNA | upstream | 47837 | 18296643 ~ 18324885 (+) | True | G334120 |
| TU395714 | lncRNA | upstream | 47898 | 18302862 ~ 18324824 (+) | False | G334120 |
| TU395656 | lncRNA | upstream | 169042 | 18203063 ~ 18203680 (+) | True | G334077 |
| TU395657 | lncRNA | upstream | 169817 | 18200395 ~ 18202905 (+) | True | G334078 |
| TU395608 | lncRNA | upstream | 263918 | 18085319 ~ 18108804 (+) | True | G334032 |
| TU395829 | lncRNA | downstream | 57525 | 18435721 ~ 18437406 (+) | True | G334209 |
| TU395830 | lncRNA | downstream | 60953 | 18439149 ~ 18439446 (+) | True | G334210 |
| TU395831 | lncRNA | downstream | 62059 | 18440255 ~ 18440656 (+) | True | G334211 |
| TU395842 | lncRNA | downstream | 96488 | 18474684 ~ 18478739 (+) | False | mcmdc2 |
| TU395840 | lncRNA | downstream | 122587 | 18500783 ~ 18530907 (+) | True | G334219 |
| XM_034298031.1 | mRNA | upstream | 49427 | 18315354 ~ 18323295 (+) | False | mtfr1 |
| XM_026937924.2 | mRNA | upstream | 155516 | 18214863 ~ 18217206 (+) | True | bhlhe22 |
| XM_026938136.2 | mRNA | upstream | 274807 | 18087647 ~ 18097915 (+) | True | ythdf3 |
| XM_026938188.2 | mRNA | upstream | 389302 | 17973204 ~ 17983420 (+) | True | lipib |
| XM_034298173.1 | mRNA | upstream | 409251 | 17960988 ~ 17963471 (+) | True | zgc:112408 |
| XM_026938222.2 | mRNA | downstream | 2095 | 18380291 ~ 18390865 (+) | True | trim55b |
| XM_026938223.2 | mRNA | downstream | 2249 | 18380445 ~ 18390865 (+) | False | trim55b |
| XM_034298263.1 | mRNA | downstream | 18031 | 18396227 ~ 18432150 (+) | True | si:dkey-97a13.12 |
| XM_026937814.2 | mRNA | downstream | 32440 | 18410636 ~ 18432150 (+) | False | si:dkey-97a13.12 |
| XM_026937813.2 | mRNA | downstream | 42790 | 18420986 ~ 18423560 (+) | True | rrs1 |
| XR_004576961.1 | other | upstream | 49427 | 18315356 ~ 18323295 (+) | False | mtfr1 |
| XR_004576962.1 | other | upstream | 49427 | 18315358 ~ 18323295 (+) | False | mtfr1 |
| XR_004576959.1 | other | upstream | 49427 | 18315360 ~ 18323295 (+) | False | mtfr1 |
| XR_004576960.1 | other | upstream | 49427 | 18315683 ~ 18323295 (+) | True | mtfr1 |
| TU395491 | other | upstream | 379708 | 17986762 ~ 17993014 (+) | True | G333943 |
| trnaa-agc_15 | other | downstream | 1106 | 18379302 ~ 18379374 (+) | True | trnaa-agc_15 |
| trnaa-agc_16 | other | downstream | 1746 | 18379942 ~ 18380014 (+) | True | trnaa-agc_16 |
| TU396015 | other | downstream | 314953 | 18693149 ~ 18717953 (+) | True | G334373 |
| TU396386 | other | downstream | 961010 | 19339206 ~ 19360737 (+) | False | dap |
| TU396388 | other | downstream | 961010 | 19339206 ~ 19427936 (+) | False | dap |
