Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026938267.2 |
| length | 1218 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 8 |
| gene id | si:ch211-161h7.5 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 17277404 ~ 17281623 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU394919 | lncRNA | downstream | 191200 | 17085883 ~ 17086204 (-) | True | G333470 |
| TU394903 | lncRNA | downstream | 239892 | 17037167 ~ 17037512 (-) | True | G333454 |
| TU394901 | lncRNA | downstream | 246707 | 17030465 ~ 17030697 (-) | True | G333452 |
| TU394860 | lncRNA | downstream | 268671 | 17007827 ~ 17008733 (-) | True | G333417 |
| TU394880 | lncRNA | downstream | 321941 | 16953725 ~ 16955463 (-) | True | G333434 |
| TU394977 | lncRNA | upstream | 4130 | 17285753 ~ 17299701 (-) | True | G333525 |
| TU394987 | lncRNA | upstream | 4130 | 17285753 ~ 17291010 (-) | False | G333525 |
| TU394988 | lncRNA | upstream | 5633 | 17287256 ~ 17295034 (-) | False | G333525 |
| TU394991 | lncRNA | upstream | 5633 | 17287256 ~ 17301996 (-) | False | G333525 |
| TU394986 | lncRNA | upstream | 8514 | 17290137 ~ 17301996 (-) | False | G333525 |
| XM_026938256.2 | mRNA | downstream | 1276 | 17266256 ~ 17276128 (-) | True | si:ch211-161h7.4 |
| XM_034298305.1 | mRNA | downstream | 38288 | 17191319 ~ 17239116 (-) | False | vipr1b |
| XM_026938244.2 | mRNA | downstream | 38298 | 17191319 ~ 17239106 (-) | True | vipr1b |
| XM_026938200.2 | mRNA | downstream | 116197 | 17142461 ~ 17161207 (-) | True | nktr |
| XM_026937796.2 | mRNA | downstream | 137719 | 17116098 ~ 17139685 (-) | True | zbtb47b |
| XM_034297896.1 | mRNA | upstream | 23532 | 17305155 ~ 17309921 (-) | True | ccdc58 |
| XM_026938088.2 | mRNA | upstream | 34897 | 17316520 ~ 17329657 (-) | True | kpna1 |
| XM_034298202.1 | mRNA | upstream | 83018 | 17364641 ~ 17378007 (-) | False | qtrt2 |
| XM_026938253.2 | mRNA | upstream | 83018 | 17364641 ~ 17378007 (-) | False | qtrt2 |
| XM_026938252.2 | mRNA | upstream | 83018 | 17364641 ~ 17377985 (-) | True | qtrt2 |
| XR_004576994.1 | other | downstream | 38298 | 17185524 ~ 17239106 (-) | False | vipr1b |
| XR_003404146.2 | other | downstream | 137719 | 17116098 ~ 17139685 (-) | False | zbtb47b |
| XR_004576965.1 | other | downstream | 397520 | 16830696 ~ 16879884 (-) | False | oxsr1b |
| XR_004576964.1 | other | downstream | 397521 | 16830696 ~ 16879883 (-) | False | oxsr1b |
| TU393587 | other | downstream | 2211594 | 14965813 ~ 15065810 (-) | False | LOC113541115 |
| TU395488 | other | upstream | 626271 | 17907894 ~ 17908812 (-) | False | LOC113541127 |
| XR_004576970.1 | other | upstream | 628315 | 17909938 ~ 17916556 (-) | False | c22h11orf65 |
| TU395529 | other | upstream | 643452 | 17925075 ~ 17926835 (-) | False | zmp:0000000991 |
| trnay-gua_3 | other | upstream | 1097413 | 18379036 ~ 18379121 (-) | True | trnay-gua_3 |
| trnay-gua_4 | other | upstream | 1098026 | 18379649 ~ 18379734 (-) | True | trnay-gua_4 |
