Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034297821.1 |
| length | 1158 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 12 |
| gene id | LOC113524801 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 460213 ~ 466623 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU383986 | lncRNA | upstream | 14088 | 444777 ~ 446125 (+) | True | G324116 |
| TU383939 | lncRNA | upstream | 22403 | 365488 ~ 437810 (+) | False | G324083 |
| TU383937 | lncRNA | upstream | 22403 | 436049 ~ 437810 (+) | True | G324083 |
| TU383950 | lncRNA | upstream | 99148 | 359123 ~ 361065 (+) | True | G324089 |
| TU383931 | lncRNA | upstream | 127412 | 331923 ~ 332801 (+) | True | G324082 |
| TU384039 | lncRNA | downstream | 77245 | 543868 ~ 548283 (+) | True | G324139 |
| TU384040 | lncRNA | downstream | 77245 | 543868 ~ 548283 (+) | False | G324139 |
| TU384041 | lncRNA | downstream | 78043 | 544666 ~ 548283 (+) | False | G324139 |
| TU384043 | lncRNA | downstream | 86100 | 552723 ~ 557118 (+) | True | G324140 |
| TU384045 | lncRNA | downstream | 89174 | 555797 ~ 556519 (+) | True | G324142 |
| XM_034297869.1 | mRNA | upstream | 3234 | 455516 ~ 456979 (+) | True | LOC117595771 |
| XM_034297870.1 | mRNA | upstream | 3234 | 455576 ~ 456979 (+) | False | LOC117595771 |
| XM_034298255.1 | mRNA | upstream | 109664 | 333684 ~ 350549 (+) | True | dpy19l1l |
| XM_034298133.1 | mRNA | upstream | 139030 | 301880 ~ 321183 (+) | True | tbx20 |
| XM_034297886.1 | mRNA | upstream | 228719 | 222517 ~ 231494 (+) | True | zgc:114181 |
| XM_034298297.1 | mRNA | downstream | 3333 | 469956 ~ 483298 (+) | True | ppox |
| XM_034298298.1 | mRNA | downstream | 3352 | 469975 ~ 483298 (+) | False | ppox |
| XM_026911132.2 | mRNA | downstream | 38691 | 505314 ~ 524157 (+) | True | zgc:162160 |
| XM_026911136.2 | mRNA | downstream | 184295 | 650918 ~ 657392 (+) | True | etsrp |
| XM_026911162.2 | mRNA | downstream | 191858 | 658481 ~ 663976 (+) | True | pycard |
| TU383942 | other | upstream | 17926 | 438391 ~ 442287 (+) | True | G324085 |
| TU383914 | other | upstream | 48104 | 354781 ~ 412109 (+) | True | G324067 |
| TU383913 | other | upstream | 138439 | 315350 ~ 321774 (+) | False | tbx20 |
| TU383926 | other | upstream | 148980 | 306181 ~ 311233 (+) | False | tbx20 |
| TU383916 | other | upstream | 167625 | 241197 ~ 292588 (+) | True | G324068 |
| TU384046 | other | downstream | 90792 | 557415 ~ 558139 (+) | True | G324143 |
| TU384003 | other | downstream | 139463 | 606086 ~ 606914 (+) | False | G324123 |
| TU384064 | other | downstream | 140989 | 607612 ~ 610009 (+) | False | G324161 |
| TU384116 | other | downstream | 279050 | 745673 ~ 748475 (+) | True | G324206 |
| XR_004576966.1 | other | downstream | 307666 | 774289 ~ 806528 (+) | True | psmc4 |
