Item | Value |
---|---|
RNA id | XM_034297824.1 |
length | 2334 |
RNA type | mRNA |
GC content | 0.59 |
exon number | 12 |
gene id | cep85 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047616.1 |
NCBI id | CM018562.1 |
chromosome length | 21037487 |
location | 831845 ~ 843562 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
id | description |
---|---|
K16766 | CEP85; centrosomal protein CEP85 |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU384127 | lncRNA | upstream | 78402 | 749451 ~ 753443 (+) | True | G324216 |
TU384129 | lncRNA | upstream | 78402 | 749451 ~ 753443 (+) | False | G324216 |
TU384105 | lncRNA | upstream | 118044 | 713395 ~ 713801 (+) | True | G324197 |
TU384065 | lncRNA | upstream | 223143 | 607612 ~ 608702 (+) | True | G324161 |
TU384063 | lncRNA | upstream | 224302 | 607045 ~ 607543 (+) | True | G324160 |
TU384216 | lncRNA | downstream | 467349 | 1310911 ~ 1315115 (+) | True | G324284 |
TU384226 | lncRNA | downstream | 486085 | 1329647 ~ 1330871 (+) | True | G324294 |
TU384239 | lncRNA | downstream | 495966 | 1339528 ~ 1368639 (+) | True | G324303 |
TU384241 | lncRNA | downstream | 497563 | 1341125 ~ 1342780 (+) | True | G324305 |
TU384269 | lncRNA | downstream | 534984 | 1378546 ~ 1378940 (+) | True | G324328 |
XM_034298117.1 | mRNA | upstream | 15700 | 806641 ~ 816145 (+) | True | si:dkey-199f5.8 |
XM_034298115.1 | mRNA | upstream | 48879 | 774289 ~ 782966 (+) | False | psmc4 |
XM_034297823.1 | mRNA | upstream | 86325 | 719389 ~ 745520 (+) | True | gramd1a |
XM_026911138.2 | mRNA | upstream | 151475 | 674868 ~ 680370 (+) | True | LOC113524791 |
XM_026911162.2 | mRNA | upstream | 167869 | 658481 ~ 663976 (+) | True | pycard |
XM_034298120.1 | mRNA | downstream | 14548 | 858110 ~ 893602 (+) | False | atp2c1 |
XM_034298121.1 | mRNA | downstream | 22832 | 866394 ~ 893602 (+) | True | atp2c1 |
XM_034297868.1 | mRNA | downstream | 60901 | 904463 ~ 906704 (+) | True | rpp25l |
XM_026911498.2 | mRNA | downstream | 60901 | 904463 ~ 906704 (+) | False | rpp25l |
XM_026911499.2 | mRNA | downstream | 60901 | 904463 ~ 906704 (+) | False | rpp25l |
XR_004576966.1 | other | upstream | 25317 | 774289 ~ 806528 (+) | True | psmc4 |
TU384116 | other | upstream | 83370 | 745673 ~ 748475 (+) | True | G324206 |
TU384064 | other | upstream | 221836 | 607612 ~ 610009 (+) | False | G324161 |
TU384003 | other | upstream | 224931 | 606086 ~ 606914 (+) | False | G324123 |
TU384046 | other | upstream | 273706 | 557415 ~ 558139 (+) | True | G324143 |
XR_004576993.1 | other | downstream | 113563 | 957125 ~ 1010223 (+) | False | cpne4a |
TU384187 | other | downstream | 274706 | 1118268 ~ 1163614 (+) | True | G324258 |
TU385279 | other | downstream | 1298944 | 2142506 ~ 2144511 (+) | False | bola1 |
XR_003403389.2 | other | downstream | 1366660 | 2210222 ~ 2214299 (+) | False | LOC113533074 |
XR_003403390.2 | other | downstream | 1366660 | 2210222 ~ 2214261 (+) | False | LOC113533074 |