Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034297869.1 |
| length | 682 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 6 |
| gene id | LOC117595771 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 455516 ~ 456979 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU383986 | lncRNA | upstream | 9391 | 444777 ~ 446125 (+) | True | G324116 |
| TU383939 | lncRNA | upstream | 17706 | 365488 ~ 437810 (+) | False | G324083 |
| TU383937 | lncRNA | upstream | 17706 | 436049 ~ 437810 (+) | True | G324083 |
| TU383950 | lncRNA | upstream | 94451 | 359123 ~ 361065 (+) | True | G324089 |
| TU383910 | lncRNA | upstream | 100213 | 326531 ~ 355303 (+) | True | G324064 |
| TU384039 | lncRNA | downstream | 86889 | 543868 ~ 548283 (+) | True | G324139 |
| TU384040 | lncRNA | downstream | 86889 | 543868 ~ 548283 (+) | False | G324139 |
| TU384041 | lncRNA | downstream | 87687 | 544666 ~ 548283 (+) | False | G324139 |
| TU384043 | lncRNA | downstream | 95744 | 552723 ~ 557118 (+) | True | G324140 |
| TU384045 | lncRNA | downstream | 98818 | 555797 ~ 556519 (+) | True | G324142 |
| XM_034298255.1 | mRNA | upstream | 104967 | 333684 ~ 350549 (+) | True | dpy19l1l |
| XM_034298133.1 | mRNA | upstream | 134333 | 301880 ~ 321183 (+) | True | tbx20 |
| XM_034297886.1 | mRNA | upstream | 224022 | 222517 ~ 231494 (+) | True | zgc:114181 |
| XM_026909662.2 | mRNA | upstream | 261890 | 182467 ~ 193626 (+) | False | cmc1 |
| XM_026912119.2 | mRNA | upstream | 340370 | 108218 ~ 115146 (+) | True | ethe1 |
| XM_034297821.1 | mRNA | downstream | 3234 | 460213 ~ 466623 (+) | True | LOC113524801 |
| XM_034298297.1 | mRNA | downstream | 12977 | 469956 ~ 483298 (+) | True | ppox |
| XM_034298298.1 | mRNA | downstream | 12996 | 469975 ~ 483298 (+) | False | ppox |
| XM_026911132.2 | mRNA | downstream | 48335 | 505314 ~ 524157 (+) | True | zgc:162160 |
| XM_026911136.2 | mRNA | downstream | 193939 | 650918 ~ 657392 (+) | True | etsrp |
| TU383942 | other | upstream | 13229 | 438391 ~ 442287 (+) | True | G324085 |
| TU383914 | other | upstream | 43407 | 354781 ~ 412109 (+) | True | G324067 |
| TU383913 | other | upstream | 133742 | 315350 ~ 321774 (+) | False | tbx20 |
| TU383926 | other | upstream | 144283 | 306181 ~ 311233 (+) | False | tbx20 |
| TU383916 | other | upstream | 162928 | 241197 ~ 292588 (+) | True | G324068 |
| TU384046 | other | downstream | 100436 | 557415 ~ 558139 (+) | True | G324143 |
| TU384003 | other | downstream | 149107 | 606086 ~ 606914 (+) | False | G324123 |
| TU384064 | other | downstream | 150633 | 607612 ~ 610009 (+) | False | G324161 |
| TU384116 | other | downstream | 288694 | 745673 ~ 748475 (+) | True | G324206 |
| XR_004576966.1 | other | downstream | 317310 | 774289 ~ 806528 (+) | True | psmc4 |
