Item | Value |
---|---|
RNA id | XM_034298068.1 |
length | 1423 |
RNA type | mRNA |
GC content | 0.46 |
exon number | 8 |
gene id | zgc:101569 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047616.1 |
NCBI id | CM018562.1 |
chromosome length | 21037487 |
location | 8839566 ~ 8851316 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
id | name | namespace |
---|---|---|
GO:0008152 | metabolic process | biological_process |
GO:0003824 | catalytic activity | molecular_function |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU390105 | lncRNA | upstream | 90533 | 8748820 ~ 8749033 (+) | True | G329288 |
TU389928 | lncRNA | upstream | 140406 | 8694403 ~ 8699160 (+) | True | G329126 |
TU389908 | lncRNA | upstream | 173730 | 8652436 ~ 8665836 (+) | True | G329111 |
TU389845 | lncRNA | upstream | 460832 | 8374954 ~ 8378734 (+) | False | osr2 |
TU389833 | lncRNA | upstream | 502984 | 8336352 ~ 8336582 (+) | True | G329042 |
TU390192 | lncRNA | downstream | 91562 | 8942878 ~ 8945556 (+) | True | G329354 |
TU390202 | lncRNA | downstream | 121921 | 8973237 ~ 8973587 (+) | True | G329361 |
TU390394 | lncRNA | downstream | 483870 | 9335186 ~ 9335808 (+) | True | G329523 |
TU390393 | lncRNA | downstream | 500834 | 9352150 ~ 9352733 (+) | True | G329522 |
XR_004576957.1 | lncRNA | downstream | 621300 | 9472616 ~ 9482817 (+) | True | LOC117595781 |
XM_034297944.1 | mRNA | upstream | 18255 | 8768746 ~ 8821311 (+) | True | LOC113532648 |
XM_034297945.1 | mRNA | upstream | 18255 | 8768746 ~ 8821311 (+) | False | LOC113532648 |
XM_034297946.1 | mRNA | upstream | 18255 | 8768746 ~ 8821311 (+) | False | LOC113532648 |
XM_026924114.2 | mRNA | upstream | 93596 | 8677355 ~ 8745970 (+) | True | atp6v0a1b |
XM_026924116.2 | mRNA | upstream | 93596 | 8677355 ~ 8745970 (+) | False | atp6v0a1b |
XM_034298066.1 | mRNA | downstream | 88 | 8851404 ~ 8922793 (+) | True | bmp6 |
XM_034298065.1 | mRNA | downstream | 1148 | 8852464 ~ 8922793 (+) | False | bmp6 |
XM_034298063.1 | mRNA | downstream | 1698 | 8853014 ~ 8922793 (+) | False | bmp6 |
XM_034298064.1 | mRNA | downstream | 1698 | 8853014 ~ 8922793 (+) | False | bmp6 |
XM_026924126.2 | mRNA | downstream | 1698 | 8853014 ~ 8922793 (+) | False | bmp6 |
XR_004576948.1 | other | upstream | 20299 | 8768746 ~ 8819267 (+) | False | LOC113532648 |
XR_004576949.1 | other | upstream | 24006 | 8768745 ~ 8815560 (+) | False | LOC113532648 |
TU389909 | other | upstream | 173730 | 8615073 ~ 8665836 (+) | False | G329111 |
XR_004576973.1 | other | upstream | 354733 | 8388187 ~ 8484833 (+) | False | LOC113532774 |
TU389428 | other | upstream | 936958 | 7901792 ~ 7902608 (+) | False | LOC113532663 |
TU390118 | other | downstream | 2012 | 8853328 ~ 8856276 (+) | False | bmp6 |
TU390686 | other | downstream | 940368 | 9791684 ~ 9792733 (+) | True | G329779 |
TU390970 | other | downstream | 1580017 | 10431333 ~ 10432864 (+) | True | G330038 |
TU390999 | other | downstream | 1743886 | 10595202 ~ 10678375 (+) | False | gli3 |
XR_004576967.1 | other | downstream | 2022893 | 10874209 ~ 10984209 (+) | True | acad11 |