Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003403393.2 |
| length | 895 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 3 |
| gene id | LOC113533080 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 7780040 ~ 7799385 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU389256 | lncRNA | downstream | 232008 | 7561326 ~ 7565192 (-) | True | G328586 |
| TU389259 | lncRNA | downstream | 238237 | 7558684 ~ 7558963 (-) | True | G328589 |
| TU389258 | lncRNA | downstream | 238551 | 7558395 ~ 7558649 (-) | True | G328588 |
| TU389250 | lncRNA | downstream | 288093 | 7508869 ~ 7509107 (-) | True | G328580 |
| TU389231 | lncRNA | downstream | 345083 | 7450397 ~ 7452117 (-) | True | G328562 |
| TU389535 | lncRNA | upstream | 104257 | 7903642 ~ 7903887 (-) | True | G328798 |
| TU389620 | lncRNA | upstream | 245598 | 8044983 ~ 8045597 (-) | True | G328864 |
| TU389677 | lncRNA | upstream | 334298 | 8133683 ~ 8133887 (-) | True | G328908 |
| TU389718 | lncRNA | upstream | 413371 | 8212756 ~ 8215254 (-) | True | G328942 |
| TU389830 | lncRNA | upstream | 534446 | 8333831 ~ 8334176 (-) | True | G329039 |
| XM_026924779.2 | mRNA | downstream | 35037 | 7711516 ~ 7762163 (-) | False | erfl1 |
| XM_026924780.2 | mRNA | downstream | 35037 | 7711516 ~ 7762163 (-) | False | erfl1 |
| XM_034297967.1 | mRNA | downstream | 35037 | 7711516 ~ 7762163 (-) | True | erfl1 |
| XM_026924781.2 | mRNA | downstream | 40547 | 7711516 ~ 7756653 (-) | False | erfl1 |
| XM_034297981.1 | mRNA | downstream | 94409 | 7659178 ~ 7702791 (-) | True | arhgef1b |
| XM_026924755.2 | mRNA | upstream | 26622 | 7826007 ~ 7832633 (-) | True | LOC113532988 |
| XM_026924133.2 | mRNA | upstream | 37275 | 7836660 ~ 7884713 (-) | False | megf8 |
| XM_026924131.2 | mRNA | upstream | 37275 | 7836660 ~ 7884713 (-) | False | megf8 |
| XM_026924130.2 | mRNA | upstream | 37275 | 7836660 ~ 7884713 (-) | False | megf8 |
| XM_034297998.1 | mRNA | upstream | 37275 | 7836660 ~ 7884713 (-) | False | megf8 |
| TU389089 | other | downstream | 410894 | 7378780 ~ 7386306 (-) | False | sec61b |
| TU388974 | other | downstream | 734772 | 7056794 ~ 7062428 (-) | True | G328342 |
| trnam-cau_47 | other | downstream | 1367268 | 6429860 ~ 6429932 (-) | True | trnam-cau_47 |
| XR_003403372.2 | other | downstream | 1818821 | 5829474 ~ 5978379 (-) | False | zfpm2a |
| XR_003404173.1 | other | upstream | 2485449 | 10284834 ~ 10284937 (-) | True | LOC113541360 |
| TU391129 | other | upstream | 2723347 | 10522732 ~ 10523263 (-) | True | G330185 |
| XR_003404157.2 | other | upstream | 3123741 | 10923126 ~ 10930775 (-) | False | ackr4b |
| TU391338 | other | upstream | 3282883 | 11082268 ~ 11083151 (-) | True | G330379 |
| TU392350 | other | upstream | 4877196 | 12676581 ~ 12677933 (-) | False | LOC113541288 |
