Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003404159.2 |
| length | 445 |
| lncRNA type | intronic |
| GC content | 0.44 |
| exon number | 4 |
| gene id | LOC113541232 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 12797361 ~ 12802125 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU392360 | lncRNA | upstream | 55683 | 12741117 ~ 12741678 (+) | True | G331280 |
| TU392357 | lncRNA | upstream | 63658 | 12732809 ~ 12733703 (+) | True | G331277 |
| TU392342 | lncRNA | upstream | 84683 | 12710519 ~ 12712678 (+) | False | G331263 |
| TU392238 | lncRNA | upstream | 347014 | 12448762 ~ 12450347 (+) | True | G331161 |
| TU392061 | lncRNA | upstream | 524071 | 12211250 ~ 12273290 (+) | True | G331003 |
| TU392425 | lncRNA | downstream | 242190 | 13044315 ~ 13049452 (+) | True | G331342 |
| TU392426 | lncRNA | downstream | 248917 | 13051042 ~ 13051859 (+) | True | G331343 |
| TU392427 | lncRNA | downstream | 252160 | 13054285 ~ 13054519 (+) | True | G331344 |
| TU392428 | lncRNA | downstream | 254393 | 13056518 ~ 13057241 (+) | True | G331345 |
| TU392432 | lncRNA | downstream | 259210 | 13061335 ~ 13061659 (+) | True | G331348 |
| XM_034298168.1 | mRNA | upstream | 84710 | 12710626 ~ 12712651 (+) | True | ccl34b.4 |
| XM_026938277.2 | mRNA | upstream | 89358 | 12706939 ~ 12708003 (+) | True | LOC113541349 |
| XM_026938086.2 | mRNA | upstream | 298315 | 12428457 ~ 12499046 (+) | True | hs6st1b |
| XM_026938147.2 | mRNA | upstream | 563178 | 12181785 ~ 12234183 (+) | True | bcl2a |
| XM_026938259.2 | mRNA | upstream | 617740 | 12162455 ~ 12179621 (+) | True | LOC113541340 |
| XM_026938128.2 | mRNA | downstream | 219042 | 13021167 ~ 13042516 (+) | True | cul1b |
| XM_026937922.2 | mRNA | downstream | 472535 | 13274660 ~ 13278025 (+) | True | skida1 |
| XM_026938109.2 | mRNA | downstream | 520212 | 13322337 ~ 13334525 (+) | True | armc3 |
| XM_026938148.2 | mRNA | downstream | 534213 | 13336338 ~ 13341661 (+) | True | msrb2 |
| XM_026938165.2 | mRNA | downstream | 541621 | 13343746 ~ 13350216 (+) | True | c8g |
| TU392341 | other | upstream | 84683 | 12706939 ~ 12712678 (+) | True | G331263 |
| XR_003404147.2 | other | upstream | 640574 | 12062332 ~ 12156787 (+) | True | prkag2a |
| TU391847 | other | upstream | 1048802 | 11738158 ~ 11748559 (+) | True | ankha |
| XR_004576969.1 | other | upstream | 1814146 | 10874209 ~ 10983215 (+) | False | acad11 |
| TU392569 | other | downstream | 455769 | 13257894 ~ 13258416 (+) | True | G331476 |
| trnat-agu_17 | other | downstream | 583076 | 13385201 ~ 13385274 (+) | True | trnat-agu_17 |
| XR_004576981.1 | other | downstream | 2449510 | 15251635 ~ 15264587 (+) | False | si:ch73-173p19.2 |
| TU393912 | other | downstream | 2764050 | 15566175 ~ 15566663 (+) | True | G332636 |
| TU394735 | other | downstream | 4305347 | 17107472 ~ 17110027 (+) | False | hhatlb |
