Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003404173.1 |
| length | 104 |
| RNA type | ncRNA |
| GC content | 0.44 |
| exon number | 1 |
| gene id | LOC113541360 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 10284834 ~ 10284937 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU390916 | lncRNA | downstream | 70970 | 10208581 ~ 10213864 (-) | True | G329996 |
| TU390917 | lncRNA | downstream | 73257 | 10208739 ~ 10211577 (-) | True | G329997 |
| XR_003404158.2 | lncRNA | downstream | 102003 | 10179575 ~ 10182831 (-) | True | LOC113541201 |
| TU390904 | lncRNA | downstream | 104521 | 10179208 ~ 10180313 (-) | False | LOC113541201 |
| TU390869 | lncRNA | downstream | 118230 | 10166075 ~ 10166604 (-) | True | G329952 |
| TU390955 | lncRNA | upstream | 32656 | 10317593 ~ 10319393 (-) | True | G330030 |
| TU391126 | lncRNA | upstream | 233928 | 10518865 ~ 10519397 (-) | True | G330182 |
| TU391071 | lncRNA | upstream | 346223 | 10631160 ~ 10639145 (-) | True | G330132 |
| TU391166 | lncRNA | upstream | 458494 | 10743431 ~ 10743993 (-) | True | G330219 |
| TU391176 | lncRNA | upstream | 475060 | 10759997 ~ 10760802 (-) | True | G330229 |
| XM_034297838.1 | mRNA | downstream | 128034 | 10151497 ~ 10156800 (-) | True | LOC113541109 |
| XM_034297837.1 | mRNA | downstream | 465301 | 9796334 ~ 9819533 (-) | True | LOC113532851 |
| XM_026924858.2 | mRNA | downstream | 567268 | 9687555 ~ 9717566 (-) | False | mppe1 |
| XM_026924857.2 | mRNA | downstream | 567270 | 9687555 ~ 9717564 (-) | True | mppe1 |
| XM_026923982.2 | mRNA | downstream | 712629 | 9552595 ~ 9572205 (-) | True | elovl2 |
| XM_026938042.2 | mRNA | upstream | 640610 | 10925547 ~ 10930775 (-) | True | ackr4b |
| XM_034298149.1 | mRNA | upstream | 690837 | 10975774 ~ 10980139 (-) | True | si:dkey-12l12.1 |
| XM_034298200.1 | mRNA | upstream | 821477 | 11106414 ~ 11109555 (-) | True | LOC113541107 |
| XM_026938249.2 | mRNA | upstream | 1023817 | 11308754 ~ 11310736 (-) | False | prlh2 |
| XM_034298214.1 | mRNA | upstream | 1023817 | 11308754 ~ 11310736 (-) | True | prlh2 |
| TU389089 | other | downstream | 2898528 | 7378780 ~ 7386306 (-) | False | sec61b |
| TU388974 | other | downstream | 3222406 | 7056794 ~ 7062428 (-) | True | G328342 |
| trnam-cau_47 | other | downstream | 3854902 | 6429860 ~ 6429932 (-) | True | trnam-cau_47 |
| XR_003403372.2 | other | downstream | 4306455 | 5829474 ~ 5978379 (-) | False | zfpm2a |
| TU388042 | other | downstream | 4306566 | 5876096 ~ 5978268 (-) | False | zfpm2a |
| TU391129 | other | upstream | 237795 | 10522732 ~ 10523263 (-) | True | G330185 |
| XR_003404157.2 | other | upstream | 638189 | 10923126 ~ 10930775 (-) | False | ackr4b |
| TU391338 | other | upstream | 797331 | 11082268 ~ 11083151 (-) | True | G330379 |
| TU392350 | other | upstream | 2391644 | 12676581 ~ 12677933 (-) | False | LOC113541288 |
| TU392351 | other | upstream | 2391644 | 12676581 ~ 12677933 (-) | False | LOC113541288 |
