Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU411849 |
| length | 1021 |
| RNA type | TUCP |
| GC content | 0.50 |
| exon number | 6 |
| gene id | LOC113528266 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047618.1 |
| NCBI id | CM018564.1 |
| chromosome length | 20251756 |
| location | 205480 ~ 210705 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU411853 | lncRNA | downstream | 200 | 175023 ~ 206293 (-) | True | G347623 |
| TU411860 | lncRNA | downstream | 65436 | 139214 ~ 141057 (-) | False | LOC117595978 |
| TU411888 | lncRNA | downstream | 67680 | 120309 ~ 138813 (-) | True | G347652 |
| TU411870 | lncRNA | downstream | 171715 | 17440 ~ 34778 (-) | True | G347634 |
| TU411951 | lncRNA | upstream | 118272 | 328914 ~ 329608 (-) | True | G347703 |
| TU411952 | lncRNA | upstream | 122600 | 333242 ~ 333755 (-) | True | G347704 |
| TU411911 | lncRNA | upstream | 143685 | 354327 ~ 355340 (-) | True | G347672 |
| XR_004577162.1 | lncRNA | upstream | 153623 | 364265 ~ 367739 (-) | False | LOC113528009 |
| TU411979 | lncRNA | upstream | 184725 | 395367 ~ 397450 (-) | True | G347723 |
| XM_034298963.1 | mRNA | downstream | 4503 | 192549 ~ 201990 (-) | True | LOC117595911 |
| XM_034298965.1 | mRNA | downstream | 21942 | 175316 ~ 184551 (-) | False | LOC113528268 |
| XM_034298964.1 | mRNA | downstream | 21944 | 175316 ~ 184549 (-) | False | LOC113528268 |
| XM_034298966.1 | mRNA | downstream | 21951 | 161020 ~ 184542 (-) | True | LOC113528268 |
| XM_034299335.1 | mRNA | downstream | 56687 | 118198 ~ 149806 (-) | True | LOC117595978 |
| XM_026916717.2 | mRNA | upstream | 10787 | 221429 ~ 226704 (-) | True | LOC113528265 |
| XM_026916718.2 | mRNA | upstream | 10787 | 221429 ~ 226447 (-) | False | LOC113528265 |
| XM_034299098.1 | mRNA | upstream | 20090 | 230732 ~ 237272 (-) | False | LOC117595925 |
| XM_034299336.1 | mRNA | upstream | 28175 | 238817 ~ 254544 (-) | True | mybbp1a |
| XM_026916564.2 | mRNA | upstream | 46885 | 257527 ~ 260223 (-) | True | fgf10b |
| TU411899 | other | downstream | 4532 | 197392 ~ 201961 (-) | False | LOC117595911 |
| TU411864 | other | downstream | 81287 | 87567 ~ 125206 (-) | True | G347628 |
| TU411852 | other | downstream | 85382 | 95363 ~ 121111 (-) | True | G347622 |
| TU411851 | other | downstream | 106831 | 86663 ~ 99662 (-) | True | G347621 |
| XR_004577111.1 | other | upstream | 19883 | 230525 ~ 237272 (-) | False | LOC117595925 |
| XR_004577112.1 | other | upstream | 19883 | 230525 ~ 236364 (-) | True | LOC117595925 |
| TU411959 | other | upstream | 153364 | 364006 ~ 367735 (-) | True | LOC113528009 |
| XR_004577138.1 | other | upstream | 653578 | 864220 ~ 924623 (-) | False | LOC113527995 |
| TU412323 | other | upstream | 866091 | 1076733 ~ 1079139 (-) | True | G347960 |
