Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU412049 |
| length | 256 |
| lncRNA type | read_through |
| GC content | 0.49 |
| exon number | 3 |
| gene id | G347773 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047618.1 |
| NCBI id | CM018564.1 |
| chromosome length | 20251756 |
| location | 810581 ~ 852436 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU412178 | lncRNA | downstream | 43985 | 766065 ~ 766596 (-) | True | G347868 |
| TU412173 | lncRNA | downstream | 45213 | 763323 ~ 765368 (-) | True | G347866 |
| TU412171 | lncRNA | downstream | 53245 | 757033 ~ 757336 (-) | True | G347864 |
| TU412162 | lncRNA | downstream | 63646 | 742817 ~ 746935 (-) | True | G347859 |
| TU412274 | lncRNA | upstream | 65165 | 917601 ~ 924667 (-) | False | LOC113527995 |
| TU412216 | lncRNA | upstream | 66948 | 919384 ~ 1389230 (-) | False | G347896 |
| TU412222 | lncRNA | upstream | 73053 | 925489 ~ 1359907 (-) | False | G347896 |
| TU412225 | lncRNA | upstream | 73053 | 925489 ~ 1467707 (-) | True | G347896 |
| TU412228 | lncRNA | upstream | 73053 | 925489 ~ 1701550 (-) | False | G347896 |
| XM_034299169.1 | mRNA | downstream | 151683 | 652989 ~ 658898 (-) | False | pgam5 |
| XM_034299168.1 | mRNA | downstream | 151683 | 652989 ~ 658898 (-) | True | pgam5 |
| XM_026917111.2 | mRNA | downstream | 233145 | 523807 ~ 577436 (-) | True | LOC113528517 |
| XM_034299346.1 | mRNA | downstream | 294309 | 475494 ~ 516272 (-) | True | LOC113528156 |
| XM_034299077.1 | mRNA | downstream | 354491 | 440336 ~ 456090 (-) | False | atp8b5a |
| XM_034299228.1 | mRNA | upstream | 4344 | 856780 ~ 924649 (-) | False | LOC113527995 |
| XM_034299229.1 | mRNA | upstream | 4344 | 856780 ~ 924623 (-) | False | LOC113527995 |
| XM_034299230.1 | mRNA | upstream | 4344 | 856780 ~ 924623 (-) | False | LOC113527995 |
| XM_034299226.1 | mRNA | upstream | 4344 | 856780 ~ 924623 (-) | False | LOC113527995 |
| XM_034299227.1 | mRNA | upstream | 4344 | 856780 ~ 924623 (-) | True | LOC113527995 |
| TU411959 | other | downstream | 442846 | 364006 ~ 367735 (-) | True | LOC113528009 |
| XR_004577111.1 | other | downstream | 573309 | 230525 ~ 237272 (-) | False | LOC117595925 |
| XR_004577112.1 | other | downstream | 574217 | 230525 ~ 236364 (-) | True | LOC117595925 |
| TU411849 | other | downstream | 599939 | 206493 ~ 210642 (-) | False | LOC113528266 |
| XR_004577138.1 | other | upstream | 11784 | 864220 ~ 924623 (-) | False | LOC113527995 |
| TU412323 | other | upstream | 224297 | 1076733 ~ 1079139 (-) | True | G347960 |
| TU412226 | other | upstream | 305355 | 1157791 ~ 1410675 (-) | False | G347896 |
| TU412230 | other | upstream | 305355 | 1157791 ~ 1297906 (-) | False | G347896 |
| TU412381 | other | upstream | 504132 | 1356568 ~ 1369462 (-) | False | LOC113524988 |
