Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU412132 |
| length | 890 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 2 |
| gene id | G347847 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047618.1 |
| NCBI id | CM018564.1 |
| chromosome length | 20251756 |
| location | 708554 ~ 715445 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU412114 | lncRNA | downstream | 32304 | 673077 ~ 676630 (-) | True | G347833 |
| TU412100 | lncRNA | downstream | 65447 | 642986 ~ 643487 (-) | True | G347821 |
| TU412035 | lncRNA | downstream | 70654 | 634759 ~ 638280 (-) | True | G347759 |
| TU412023 | lncRNA | downstream | 89372 | 527948 ~ 619562 (-) | True | G347753 |
| TU412154 | lncRNA | upstream | 27372 | 742817 ~ 746215 (-) | False | G347859 |
| TU412155 | lncRNA | upstream | 27372 | 742817 ~ 746215 (-) | False | G347859 |
| TU412156 | lncRNA | upstream | 27372 | 742817 ~ 746215 (-) | False | G347859 |
| TU412157 | lncRNA | upstream | 27372 | 742817 ~ 746215 (-) | False | G347859 |
| TU412158 | lncRNA | upstream | 27372 | 742817 ~ 746215 (-) | False | G347859 |
| XM_034299169.1 | mRNA | downstream | 50036 | 652989 ~ 658898 (-) | False | pgam5 |
| XM_034299168.1 | mRNA | downstream | 50036 | 652989 ~ 658898 (-) | True | pgam5 |
| XM_026917111.2 | mRNA | downstream | 131498 | 523807 ~ 577436 (-) | True | LOC113528517 |
| XM_034299346.1 | mRNA | downstream | 192662 | 475494 ~ 516272 (-) | True | LOC113528156 |
| XM_034299077.1 | mRNA | downstream | 252844 | 440336 ~ 456090 (-) | False | atp8b5a |
| XM_026916266.2 | mRNA | upstream | 122116 | 837561 ~ 844476 (-) | False | LOC113528030 |
| XM_026916264.2 | mRNA | upstream | 122116 | 837561 ~ 841880 (-) | True | LOC113528030 |
| XM_026916267.2 | mRNA | upstream | 122116 | 837561 ~ 841054 (-) | False | LOC113528030 |
| XM_026916212.2 | mRNA | upstream | 133941 | 849386 ~ 851691 (-) | True | tal2 |
| XM_034299228.1 | mRNA | upstream | 141335 | 856780 ~ 924649 (-) | False | LOC113527995 |
| TU411959 | other | downstream | 341199 | 364006 ~ 367735 (-) | True | LOC113528009 |
| XR_004577111.1 | other | downstream | 471662 | 230525 ~ 237272 (-) | False | LOC117595925 |
| XR_004577112.1 | other | downstream | 472570 | 230525 ~ 236364 (-) | True | LOC117595925 |
| TU411849 | other | downstream | 498292 | 206493 ~ 210642 (-) | False | LOC113528266 |
| XR_004577138.1 | other | upstream | 148775 | 864220 ~ 924623 (-) | False | LOC113527995 |
| TU412323 | other | upstream | 361288 | 1076733 ~ 1079139 (-) | True | G347960 |
| TU412226 | other | upstream | 442346 | 1157791 ~ 1410675 (-) | False | G347896 |
| TU412230 | other | upstream | 442346 | 1157791 ~ 1297906 (-) | False | G347896 |
| TU412381 | other | upstream | 641123 | 1356568 ~ 1369462 (-) | False | LOC113524988 |
