Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU412178 |
| length | 204 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 2 |
| gene id | G347868 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047618.1 |
| NCBI id | CM018564.1 |
| chromosome length | 20251756 |
| location | 766065 ~ 766596 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU412173 | lncRNA | downstream | 697 | 763323 ~ 765368 (-) | True | G347866 |
| TU412171 | lncRNA | downstream | 8729 | 757033 ~ 757336 (-) | True | G347864 |
| TU412162 | lncRNA | downstream | 19130 | 742817 ~ 746935 (-) | True | G347859 |
| TU412161 | lncRNA | downstream | 19850 | 742817 ~ 746215 (-) | False | G347859 |
| TU412049 | lncRNA | upstream | 43985 | 810581 ~ 852436 (-) | True | G347773 |
| XR_004577125.1 | lncRNA | upstream | 60068 | 826664 ~ 829841 (-) | True | LOC117595935 |
| XR_004577124.1 | lncRNA | upstream | 64214 | 830810 ~ 837338 (-) | False | LOC117595934 |
| TU412034 | lncRNA | upstream | 64387 | 830983 ~ 832930 (-) | True | G347758 |
| TU412047 | lncRNA | upstream | 66767 | 833363 ~ 834896 (-) | True | LOC117595934 |
| XM_034299169.1 | mRNA | downstream | 107167 | 652989 ~ 658898 (-) | False | pgam5 |
| XM_034299168.1 | mRNA | downstream | 107167 | 652989 ~ 658898 (-) | True | pgam5 |
| XM_026917111.2 | mRNA | downstream | 188629 | 523807 ~ 577436 (-) | True | LOC113528517 |
| XM_034299346.1 | mRNA | downstream | 249793 | 475494 ~ 516272 (-) | True | LOC113528156 |
| XM_034299077.1 | mRNA | downstream | 309975 | 440336 ~ 456090 (-) | False | atp8b5a |
| XM_026916266.2 | mRNA | upstream | 70965 | 837561 ~ 844476 (-) | False | LOC113528030 |
| XM_026916264.2 | mRNA | upstream | 70965 | 837561 ~ 841880 (-) | True | LOC113528030 |
| XM_026916267.2 | mRNA | upstream | 70965 | 837561 ~ 841054 (-) | False | LOC113528030 |
| XM_026916212.2 | mRNA | upstream | 82790 | 849386 ~ 851691 (-) | True | tal2 |
| XM_034299228.1 | mRNA | upstream | 90184 | 856780 ~ 924649 (-) | False | LOC113527995 |
| TU411959 | other | downstream | 398330 | 364006 ~ 367735 (-) | True | LOC113528009 |
| XR_004577111.1 | other | downstream | 528793 | 230525 ~ 237272 (-) | False | LOC117595925 |
| XR_004577112.1 | other | downstream | 529701 | 230525 ~ 236364 (-) | True | LOC117595925 |
| TU411849 | other | downstream | 555423 | 206493 ~ 210642 (-) | False | LOC113528266 |
| XR_004577138.1 | other | upstream | 97624 | 864220 ~ 924623 (-) | False | LOC113527995 |
| TU412323 | other | upstream | 310137 | 1076733 ~ 1079139 (-) | True | G347960 |
| TU412226 | other | upstream | 391195 | 1157791 ~ 1410675 (-) | False | G347896 |
| TU412230 | other | upstream | 391195 | 1157791 ~ 1297906 (-) | False | G347896 |
| TU412381 | other | upstream | 589972 | 1356568 ~ 1369462 (-) | False | LOC113524988 |
