Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU412270 |
| length | 278 |
| lncRNA type | intronic |
| GC content | 0.41 |
| exon number | 3 |
| gene id | G347916 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047618.1 |
| NCBI id | CM018564.1 |
| chromosome length | 20251756 |
| location | 1496410 ~ 1496871 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU412225 | lncRNA | downstream | 28703 | 925489 ~ 1467707 (-) | True | G347896 |
| TU412223 | lncRNA | downstream | 28703 | 961551 ~ 1467707 (-) | False | G347896 |
| TU412244 | lncRNA | downstream | 28703 | 1447814 ~ 1467707 (-) | False | G347896 |
| TU412245 | lncRNA | downstream | 30179 | 925489 ~ 1466231 (-) | False | G347896 |
| TU412322 | lncRNA | downstream | 31929 | 1069718 ~ 1464481 (-) | True | G347959 |
| TU412386 | lncRNA | upstream | 30854 | 1527725 ~ 1530278 (-) | False | LOC113542373 |
| XR_004577149.1 | lncRNA | upstream | 85849 | 1582720 ~ 1605702 (-) | True | LOC117595968 |
| TU412255 | lncRNA | upstream | 135320 | 1632191 ~ 1638134 (-) | True | G347901 |
| TU412446 | lncRNA | upstream | 149807 | 1646678 ~ 1710908 (-) | False | LOC117595719 |
| TU412445 | lncRNA | upstream | 195056 | 1691927 ~ 1710908 (-) | False | LOC117595719 |
| XM_034299283.1 | mRNA | downstream | 54218 | 1433006 ~ 1442192 (-) | True | LOC113528310 |
| XM_026911400.2 | mRNA | downstream | 64929 | 1425099 ~ 1431481 (-) | True | LOC113524989 |
| XM_034299353.1 | mRNA | downstream | 75704 | 1350316 ~ 1420706 (-) | True | LOC113524983 |
| XM_034299285.1 | mRNA | downstream | 126978 | 1358558 ~ 1369432 (-) | True | LOC113524988 |
| XM_034299352.1 | mRNA | downstream | 180023 | 1314499 ~ 1316387 (-) | True | LOC113528146 |
| XM_026939866.2 | mRNA | upstream | 8768 | 1505639 ~ 1530394 (-) | False | LOC113542373 |
| XM_026939867.2 | mRNA | upstream | 8768 | 1505639 ~ 1530394 (-) | True | LOC113542373 |
| XM_034299297.1 | mRNA | upstream | 8768 | 1505639 ~ 1512287 (-) | False | LOC113542373 |
| XM_034299296.1 | mRNA | upstream | 8769 | 1505640 ~ 1512342 (-) | False | LOC113542373 |
| XM_026939849.2 | mRNA | upstream | 38724 | 1535595 ~ 1558524 (-) | True | slc6a4b |
| TU412226 | other | downstream | 85735 | 1157791 ~ 1410675 (-) | False | G347896 |
| TU412381 | other | downstream | 126948 | 1356568 ~ 1369462 (-) | False | LOC113524988 |
| TU412230 | other | downstream | 198504 | 1157791 ~ 1297906 (-) | False | G347896 |
| TU412323 | other | downstream | 417271 | 1076733 ~ 1079139 (-) | True | G347960 |
| XR_004577138.1 | other | downstream | 571787 | 864220 ~ 924623 (-) | False | LOC113527995 |
| XR_003404300.2 | other | upstream | 10744 | 1507615 ~ 1530394 (-) | False | LOC113542373 |
| XR_003404299.2 | other | upstream | 30721 | 1527592 ~ 1530388 (-) | False | LOC113542373 |
| XR_004577143.1 | other | upstream | 31907 | 1528778 ~ 1530394 (-) | False | LOC113542373 |
| trnak-uuu_19 | other | upstream | 101599 | 1598470 ~ 1598542 (-) | True | trnak-uuu_19 |
| TU412500 | other | upstream | 331027 | 1827898 ~ 1828645 (-) | True | G348096 |
