Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU412335 |
| length | 600 |
| lncRNA type | read_through |
| GC content | 0.36 |
| exon number | 2 |
| gene id | G347969 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047618.1 |
| NCBI id | CM018564.1 |
| chromosome length | 20251756 |
| location | 1095034 ~ 1277213 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU412231 | lncRNA | downstream | 21333 | 1056423 ~ 1073701 (-) | False | G347896 |
| TU412318 | lncRNA | downstream | 56837 | 1036539 ~ 1038197 (-) | False | G347955 |
| TU412317 | lncRNA | downstream | 57702 | 1036539 ~ 1037332 (-) | True | G347955 |
| TU412274 | lncRNA | downstream | 170367 | 917601 ~ 924667 (-) | False | LOC113527995 |
| XR_004577124.1 | lncRNA | downstream | 257696 | 830810 ~ 837338 (-) | False | LOC117595934 |
| XR_004577145.1 | lncRNA | upstream | 32476 | 1309689 ~ 1311494 (-) | True | LOC117595965 |
| XR_004577144.1 | lncRNA | upstream | 61595 | 1338808 ~ 1339841 (-) | True | LOC113524984 |
| TU412383 | lncRNA | upstream | 124643 | 1401856 ~ 1402831 (-) | True | G348011 |
| TU412384 | lncRNA | upstream | 131748 | 1408961 ~ 1463632 (-) | True | G348012 |
| TU412244 | lncRNA | upstream | 170601 | 1447814 ~ 1467707 (-) | False | G347896 |
| XM_034299298.1 | mRNA | downstream | 6071 | 1086342 ~ 1088963 (-) | False | LOC117595672 |
| XM_026911376.2 | mRNA | downstream | 85440 | 1005640 ~ 1009594 (-) | True | kctd10 |
| XM_034299288.1 | mRNA | downstream | 85970 | 1005640 ~ 1009064 (-) | False | kctd10 |
| XM_026911375.2 | mRNA | downstream | 114345 | 976948 ~ 980689 (-) | True | foxn4 |
| XM_034299229.1 | mRNA | downstream | 170411 | 856780 ~ 924623 (-) | False | LOC113527995 |
| XM_034299351.1 | mRNA | upstream | 16661 | 1293874 ~ 1297808 (-) | True | LOC117595981 |
| XM_034299352.1 | mRNA | upstream | 37286 | 1314499 ~ 1316387 (-) | True | LOC113528146 |
| XM_034299353.1 | mRNA | upstream | 73103 | 1350316 ~ 1420706 (-) | True | LOC113524983 |
| XM_034299285.1 | mRNA | upstream | 81345 | 1358558 ~ 1369432 (-) | True | LOC113524988 |
| XM_026911400.2 | mRNA | upstream | 147886 | 1425099 ~ 1431481 (-) | True | LOC113524989 |
| TU412323 | other | downstream | 15895 | 1076733 ~ 1079139 (-) | True | G347960 |
| XR_004577138.1 | other | downstream | 170411 | 864220 ~ 924623 (-) | False | LOC113527995 |
| TU411959 | other | downstream | 727299 | 364006 ~ 367735 (-) | True | LOC113528009 |
| XR_004577111.1 | other | downstream | 857762 | 230525 ~ 237272 (-) | False | LOC117595925 |
| TU412381 | other | upstream | 79355 | 1356568 ~ 1369462 (-) | False | LOC113524988 |
| XR_003404300.2 | other | upstream | 230402 | 1507615 ~ 1530394 (-) | False | LOC113542373 |
| XR_003404299.2 | other | upstream | 250379 | 1527592 ~ 1530388 (-) | False | LOC113542373 |
| XR_004577143.1 | other | upstream | 251565 | 1528778 ~ 1530394 (-) | False | LOC113542373 |
| trnak-uuu_19 | other | upstream | 321257 | 1598470 ~ 1598542 (-) | True | trnak-uuu_19 |
