Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU412383 |
| length | 321 |
| lncRNA type | intronic |
| GC content | 0.36 |
| exon number | 3 |
| gene id | G348011 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047618.1 |
| NCBI id | CM018564.1 |
| chromosome length | 20251756 |
| location | 1401856 ~ 1402831 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU412236 | lncRNA | downstream | 12540 | 925489 ~ 1389316 (-) | False | G347896 |
| TU412216 | lncRNA | downstream | 12626 | 919384 ~ 1389230 (-) | False | G347896 |
| TU412222 | lncRNA | downstream | 41949 | 925489 ~ 1359907 (-) | False | G347896 |
| TU412240 | lncRNA | downstream | 41949 | 925489 ~ 1359907 (-) | False | G347896 |
| XR_004577144.1 | lncRNA | downstream | 62015 | 1338808 ~ 1339841 (-) | True | LOC113524984 |
| TU412384 | lncRNA | upstream | 6130 | 1408961 ~ 1463632 (-) | True | G348012 |
| TU412244 | lncRNA | upstream | 44983 | 1447814 ~ 1467707 (-) | False | G347896 |
| TU412270 | lncRNA | upstream | 93579 | 1496410 ~ 1496871 (-) | True | G347916 |
| TU412386 | lncRNA | upstream | 124894 | 1527725 ~ 1530278 (-) | False | LOC113542373 |
| XR_004577149.1 | lncRNA | upstream | 179889 | 1582720 ~ 1605702 (-) | True | LOC117595968 |
| XM_034299285.1 | mRNA | downstream | 32424 | 1358558 ~ 1369432 (-) | True | LOC113524988 |
| XM_034299352.1 | mRNA | downstream | 85469 | 1314499 ~ 1316387 (-) | True | LOC113528146 |
| XM_034299351.1 | mRNA | downstream | 104048 | 1293874 ~ 1297808 (-) | True | LOC117595981 |
| XM_034299311.1 | mRNA | downstream | 122989 | 1270135 ~ 1278867 (-) | False | LOC113524981 |
| XM_034299263.1 | mRNA | downstream | 143914 | 1251870 ~ 1257942 (-) | True | LOC117595953 |
| XM_026911400.2 | mRNA | upstream | 22268 | 1425099 ~ 1431481 (-) | True | LOC113524989 |
| XM_034299283.1 | mRNA | upstream | 30175 | 1433006 ~ 1442192 (-) | True | LOC113528310 |
| XM_034299266.1 | mRNA | upstream | 47504 | 1450335 ~ 1710902 (-) | True | LOC117595719 |
| XM_026939866.2 | mRNA | upstream | 102808 | 1505639 ~ 1530394 (-) | False | LOC113542373 |
| XM_026939867.2 | mRNA | upstream | 102808 | 1505639 ~ 1530394 (-) | True | LOC113542373 |
| TU412381 | other | downstream | 32394 | 1356568 ~ 1369462 (-) | False | LOC113524988 |
| TU412230 | other | downstream | 103950 | 1157791 ~ 1297906 (-) | False | G347896 |
| TU412323 | other | downstream | 322717 | 1076733 ~ 1079139 (-) | True | G347960 |
| XR_004577138.1 | other | downstream | 477233 | 864220 ~ 924623 (-) | False | LOC113527995 |
| TU411959 | other | downstream | 1034121 | 364006 ~ 367735 (-) | True | LOC113528009 |
| XR_003404300.2 | other | upstream | 104784 | 1507615 ~ 1530394 (-) | False | LOC113542373 |
| XR_003404299.2 | other | upstream | 124761 | 1527592 ~ 1530388 (-) | False | LOC113542373 |
| XR_004577143.1 | other | upstream | 125947 | 1528778 ~ 1530394 (-) | False | LOC113542373 |
| trnak-uuu_19 | other | upstream | 195639 | 1598470 ~ 1598542 (-) | True | trnak-uuu_19 |
| TU412500 | other | upstream | 425067 | 1827898 ~ 1828645 (-) | True | G348096 |
