Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU412384 |
| length | 320 |
| lncRNA type | read_through |
| GC content | 0.47 |
| exon number | 2 |
| gene id | G348012 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047618.1 |
| NCBI id | CM018564.1 |
| chromosome length | 20251756 |
| location | 1408961 ~ 1463632 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU412383 | lncRNA | downstream | 6130 | 1401856 ~ 1402831 (-) | True | G348011 |
| TU412236 | lncRNA | downstream | 19645 | 925489 ~ 1389316 (-) | False | G347896 |
| TU412216 | lncRNA | downstream | 19731 | 919384 ~ 1389230 (-) | False | G347896 |
| TU412222 | lncRNA | downstream | 49054 | 925489 ~ 1359907 (-) | False | G347896 |
| TU412240 | lncRNA | downstream | 49054 | 925489 ~ 1359907 (-) | False | G347896 |
| TU412270 | lncRNA | upstream | 32778 | 1496410 ~ 1496871 (-) | True | G347916 |
| TU412386 | lncRNA | upstream | 64093 | 1527725 ~ 1530278 (-) | False | LOC113542373 |
| XR_004577149.1 | lncRNA | upstream | 119088 | 1582720 ~ 1605702 (-) | True | LOC117595968 |
| TU412255 | lncRNA | upstream | 168559 | 1632191 ~ 1638134 (-) | True | G347901 |
| TU412446 | lncRNA | upstream | 183046 | 1646678 ~ 1710908 (-) | False | LOC117595719 |
| XM_034299285.1 | mRNA | downstream | 39529 | 1358558 ~ 1369432 (-) | True | LOC113524988 |
| XM_034299352.1 | mRNA | downstream | 92574 | 1314499 ~ 1316387 (-) | True | LOC113528146 |
| XM_034299351.1 | mRNA | downstream | 111153 | 1293874 ~ 1297808 (-) | True | LOC117595981 |
| XM_034299311.1 | mRNA | downstream | 130094 | 1270135 ~ 1278867 (-) | False | LOC113524981 |
| XM_034299263.1 | mRNA | downstream | 151019 | 1251870 ~ 1257942 (-) | True | LOC117595953 |
| XM_026939866.2 | mRNA | upstream | 42007 | 1505639 ~ 1530394 (-) | False | LOC113542373 |
| XM_026939867.2 | mRNA | upstream | 42007 | 1505639 ~ 1530394 (-) | True | LOC113542373 |
| XM_034299297.1 | mRNA | upstream | 42007 | 1505639 ~ 1512287 (-) | False | LOC113542373 |
| XM_034299296.1 | mRNA | upstream | 42008 | 1505640 ~ 1512342 (-) | False | LOC113542373 |
| XM_026939849.2 | mRNA | upstream | 71963 | 1535595 ~ 1558524 (-) | True | slc6a4b |
| TU412381 | other | downstream | 39499 | 1356568 ~ 1369462 (-) | False | LOC113524988 |
| TU412230 | other | downstream | 111055 | 1157791 ~ 1297906 (-) | False | G347896 |
| TU412323 | other | downstream | 329822 | 1076733 ~ 1079139 (-) | True | G347960 |
| XR_004577138.1 | other | downstream | 484338 | 864220 ~ 924623 (-) | False | LOC113527995 |
| TU411959 | other | downstream | 1041226 | 364006 ~ 367735 (-) | True | LOC113528009 |
| XR_003404300.2 | other | upstream | 43983 | 1507615 ~ 1530394 (-) | False | LOC113542373 |
| XR_003404299.2 | other | upstream | 63960 | 1527592 ~ 1530388 (-) | False | LOC113542373 |
| XR_004577143.1 | other | upstream | 65146 | 1528778 ~ 1530394 (-) | False | LOC113542373 |
| trnak-uuu_19 | other | upstream | 134838 | 1598470 ~ 1598542 (-) | True | trnak-uuu_19 |
| TU412500 | other | upstream | 364266 | 1827898 ~ 1828645 (-) | True | G348096 |
