Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003404300.2 |
| length | 643 |
| RNA type | misc_RNA |
| GC content | 0.47 |
| exon number | 4 |
| gene id | LOC113542373 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047618.1 |
| NCBI id | CM018564.1 |
| chromosome length | 20251756 |
| location | 1505639 ~ 1530394 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU412270 | lncRNA | downstream | 10744 | 1496410 ~ 1496871 (-) | True | G347916 |
| TU412225 | lncRNA | downstream | 39908 | 925489 ~ 1467707 (-) | True | G347896 |
| TU412223 | lncRNA | downstream | 39908 | 961551 ~ 1467707 (-) | False | G347896 |
| TU412244 | lncRNA | downstream | 39908 | 1447814 ~ 1467707 (-) | False | G347896 |
| TU412245 | lncRNA | downstream | 41384 | 925489 ~ 1466231 (-) | False | G347896 |
| XR_004577149.1 | lncRNA | upstream | 52326 | 1582720 ~ 1605702 (-) | True | LOC117595968 |
| TU412255 | lncRNA | upstream | 101797 | 1632191 ~ 1638134 (-) | True | G347901 |
| TU412446 | lncRNA | upstream | 116284 | 1646678 ~ 1710908 (-) | False | LOC117595719 |
| TU412445 | lncRNA | upstream | 161533 | 1691927 ~ 1710908 (-) | False | LOC117595719 |
| TU412452 | lncRNA | upstream | 162749 | 1693143 ~ 1795534 (-) | True | G348067 |
| XM_034299283.1 | mRNA | downstream | 65423 | 1433006 ~ 1442192 (-) | True | LOC113528310 |
| XM_026911400.2 | mRNA | downstream | 76134 | 1425099 ~ 1431481 (-) | True | LOC113524989 |
| XM_034299353.1 | mRNA | downstream | 86909 | 1350316 ~ 1420706 (-) | True | LOC113524983 |
| XM_034299285.1 | mRNA | downstream | 138183 | 1358558 ~ 1369432 (-) | True | LOC113524988 |
| XM_034299352.1 | mRNA | downstream | 191228 | 1314499 ~ 1316387 (-) | True | LOC113528146 |
| XM_026939849.2 | mRNA | upstream | 5201 | 1535595 ~ 1558524 (-) | True | slc6a4b |
| XM_034299267.1 | mRNA | upstream | 170658 | 1701052 ~ 1710902 (-) | False | LOC117595719 |
| XM_034299265.1 | mRNA | upstream | 170919 | 1701313 ~ 1710902 (-) | False | LOC117595719 |
| XM_034299290.1 | mRNA | upstream | 356258 | 1886652 ~ 1892126 (-) | True | fam151b |
| XM_026939781.2 | mRNA | upstream | 356258 | 1886652 ~ 1892125 (-) | False | fam151b |
| TU412226 | other | downstream | 96940 | 1157791 ~ 1410675 (-) | False | G347896 |
| TU412381 | other | downstream | 138153 | 1356568 ~ 1369462 (-) | False | LOC113524988 |
| TU412230 | other | downstream | 209709 | 1157791 ~ 1297906 (-) | False | G347896 |
| TU412323 | other | downstream | 428476 | 1076733 ~ 1079139 (-) | True | G347960 |
| XR_004577138.1 | other | downstream | 582992 | 864220 ~ 924623 (-) | False | LOC113527995 |
| trnak-uuu_19 | other | upstream | 68076 | 1598470 ~ 1598542 (-) | True | trnak-uuu_19 |
| TU412500 | other | upstream | 297504 | 1827898 ~ 1828645 (-) | True | G348096 |
| TU412577 | other | upstream | 465508 | 1995902 ~ 1998470 (-) | True | G348145 |
| TU412644 | other | upstream | 649149 | 2179543 ~ 2185944 (-) | False | LOC113542580 |
| TU412645 | other | upstream | 649149 | 2179543 ~ 2231567 (-) | False | LOC113542580 |
