Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU412445 |
| length | 318 |
| lncRNA type | sense_over |
| GC content | 0.41 |
| exon number | 2 |
| gene id | LOC117595719 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047618.1 |
| NCBI id | CM018564.1 |
| chromosome length | 20251756 |
| location | 1450335 ~ 1710908 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU412255 | lncRNA | downstream | 53793 | 1632191 ~ 1638134 (-) | True | G347901 |
| XR_004577149.1 | lncRNA | downstream | 86225 | 1582720 ~ 1605702 (-) | True | LOC117595968 |
| TU412386 | lncRNA | downstream | 161649 | 1527725 ~ 1530278 (-) | False | LOC113542373 |
| TU412270 | lncRNA | downstream | 195056 | 1496410 ~ 1496871 (-) | True | G347916 |
| TU412225 | lncRNA | downstream | 224220 | 925489 ~ 1467707 (-) | True | G347896 |
| TU412466 | lncRNA | upstream | 22998 | 1733906 ~ 1859612 (-) | True | G348079 |
| TU412254 | lncRNA | upstream | 24005 | 1734913 ~ 1742300 (-) | True | G347900 |
| TU412259 | lncRNA | upstream | 52303 | 1763211 ~ 1766929 (-) | True | G347905 |
| TU412476 | lncRNA | upstream | 74117 | 1785025 ~ 1866074 (-) | True | G348088 |
| TU412483 | lncRNA | upstream | 79209 | 1790117 ~ 1871146 (-) | True | G348092 |
| XM_026939849.2 | mRNA | downstream | 133403 | 1535595 ~ 1558524 (-) | True | slc6a4b |
| XM_026939866.2 | mRNA | downstream | 161533 | 1505639 ~ 1530394 (-) | False | LOC113542373 |
| XM_026939867.2 | mRNA | downstream | 161533 | 1505639 ~ 1530394 (-) | True | LOC113542373 |
| XM_034299296.1 | mRNA | downstream | 179585 | 1505640 ~ 1512342 (-) | False | LOC113542373 |
| XM_034299297.1 | mRNA | downstream | 179640 | 1505639 ~ 1512287 (-) | False | LOC113542373 |
| XM_034299290.1 | mRNA | upstream | 175744 | 1886652 ~ 1892126 (-) | True | fam151b |
| XM_026939781.2 | mRNA | upstream | 175744 | 1886652 ~ 1892125 (-) | False | fam151b |
| XM_026939782.2 | mRNA | upstream | 175744 | 1886652 ~ 1892124 (-) | False | fam151b |
| XM_026939783.2 | mRNA | upstream | 176164 | 1887072 ~ 1892126 (-) | False | fam151b |
| XM_034299260.1 | mRNA | upstream | 181360 | 1892268 ~ 1898413 (-) | False | ccdc125 |
| trnak-uuu_19 | other | downstream | 93385 | 1598470 ~ 1598542 (-) | True | trnak-uuu_19 |
| XR_003404300.2 | other | downstream | 161533 | 1507615 ~ 1530394 (-) | False | LOC113542373 |
| XR_004577143.1 | other | downstream | 161533 | 1528778 ~ 1530394 (-) | False | LOC113542373 |
| XR_003404299.2 | other | downstream | 161539 | 1527592 ~ 1530388 (-) | False | LOC113542373 |
| TU412381 | other | downstream | 322465 | 1356568 ~ 1369462 (-) | False | LOC113524988 |
| TU412500 | other | upstream | 116990 | 1827898 ~ 1828645 (-) | True | G348096 |
| TU412577 | other | upstream | 284994 | 1995902 ~ 1998470 (-) | True | G348145 |
| TU412644 | other | upstream | 468635 | 2179543 ~ 2185944 (-) | False | LOC113542580 |
| TU412645 | other | upstream | 468635 | 2179543 ~ 2231567 (-) | False | LOC113542580 |
| TU412757 | other | upstream | 926847 | 2637755 ~ 2664375 (-) | False | zmat4a |
