Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU412497 |
| length | 528 |
| lncRNA type | inter_gene |
| GC content | 0.33 |
| exon number | 2 |
| gene id | G348094 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047618.1 |
| NCBI id | CM018564.1 |
| chromosome length | 20251756 |
| location | 1794830 ~ 1875756 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU412259 | lncRNA | downstream | 27901 | 1763211 ~ 1766929 (-) | True | G347905 |
| TU412254 | lncRNA | downstream | 52530 | 1734913 ~ 1742300 (-) | True | G347900 |
| TU412446 | lncRNA | downstream | 83922 | 1646678 ~ 1710908 (-) | False | LOC117595719 |
| TU412445 | lncRNA | downstream | 83922 | 1691927 ~ 1710908 (-) | False | LOC117595719 |
| TU412255 | lncRNA | downstream | 156696 | 1632191 ~ 1638134 (-) | True | G347901 |
| TU412516 | lncRNA | upstream | 106298 | 1982054 ~ 2021135 (-) | False | arvcfb |
| TU412574 | lncRNA | upstream | 110427 | 1986183 ~ 1987047 (-) | True | G348143 |
| TU412579 | lncRNA | upstream | 157801 | 2033557 ~ 2033864 (-) | True | G348147 |
| TU412614 | lncRNA | upstream | 235907 | 2111663 ~ 2181860 (-) | True | G348180 |
| TU412635 | lncRNA | upstream | 265860 | 2141616 ~ 2142102 (-) | True | G348200 |
| XM_034299267.1 | mRNA | downstream | 83928 | 1701052 ~ 1710902 (-) | False | LOC117595719 |
| XM_034299265.1 | mRNA | downstream | 83928 | 1701313 ~ 1710902 (-) | False | LOC117595719 |
| XM_026939849.2 | mRNA | downstream | 236306 | 1535595 ~ 1558524 (-) | True | slc6a4b |
| XM_034299296.1 | mRNA | downstream | 282488 | 1505640 ~ 1512342 (-) | False | LOC113542373 |
| XM_034299297.1 | mRNA | downstream | 282543 | 1505639 ~ 1512287 (-) | False | LOC113542373 |
| XM_034299290.1 | mRNA | upstream | 10896 | 1886652 ~ 1892126 (-) | True | fam151b |
| XM_026939781.2 | mRNA | upstream | 10896 | 1886652 ~ 1892125 (-) | False | fam151b |
| XM_026939782.2 | mRNA | upstream | 10896 | 1886652 ~ 1892124 (-) | False | fam151b |
| XM_026939783.2 | mRNA | upstream | 11316 | 1887072 ~ 1892126 (-) | False | fam151b |
| XM_034299260.1 | mRNA | upstream | 16512 | 1892268 ~ 1898413 (-) | False | ccdc125 |
| trnak-uuu_19 | other | downstream | 196288 | 1598470 ~ 1598542 (-) | True | trnak-uuu_19 |
| XR_003404300.2 | other | downstream | 264436 | 1507615 ~ 1530394 (-) | False | LOC113542373 |
| XR_004577143.1 | other | downstream | 264436 | 1528778 ~ 1530394 (-) | False | LOC113542373 |
| XR_003404299.2 | other | downstream | 264442 | 1527592 ~ 1530388 (-) | False | LOC113542373 |
| TU412381 | other | downstream | 425368 | 1356568 ~ 1369462 (-) | False | LOC113524988 |
| TU412577 | other | upstream | 120146 | 1995902 ~ 1998470 (-) | True | G348145 |
| TU412644 | other | upstream | 303787 | 2179543 ~ 2185944 (-) | False | LOC113542580 |
| TU412645 | other | upstream | 303787 | 2179543 ~ 2231567 (-) | False | LOC113542580 |
| TU412757 | other | upstream | 761999 | 2637755 ~ 2664375 (-) | False | zmat4a |
| TU412979 | other | upstream | 908921 | 2784677 ~ 2785896 (-) | True | G348491 |
