Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU412511 |
| length | 320 |
| lncRNA type | read_through |
| GC content | 0.34 |
| exon number | 2 |
| gene id | G348103 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047618.1 |
| NCBI id | CM018564.1 |
| chromosome length | 20251756 |
| location | 1805996 ~ 1942711 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU412452 | lncRNA | downstream | 10462 | 1693143 ~ 1795534 (-) | True | G348067 |
| TU412259 | lncRNA | downstream | 39067 | 1763211 ~ 1766929 (-) | True | G347905 |
| TU412254 | lncRNA | downstream | 63696 | 1734913 ~ 1742300 (-) | True | G347900 |
| TU412446 | lncRNA | downstream | 95088 | 1646678 ~ 1710908 (-) | False | LOC117595719 |
| TU412445 | lncRNA | downstream | 95088 | 1691927 ~ 1710908 (-) | False | LOC117595719 |
| TU412516 | lncRNA | upstream | 39343 | 1982054 ~ 2021135 (-) | False | arvcfb |
| TU412574 | lncRNA | upstream | 43472 | 1986183 ~ 1987047 (-) | True | G348143 |
| TU412579 | lncRNA | upstream | 90846 | 2033557 ~ 2033864 (-) | True | G348147 |
| TU412614 | lncRNA | upstream | 168952 | 2111663 ~ 2181860 (-) | True | G348180 |
| TU412635 | lncRNA | upstream | 198905 | 2141616 ~ 2142102 (-) | True | G348200 |
| XM_034299267.1 | mRNA | downstream | 95094 | 1701052 ~ 1710902 (-) | False | LOC117595719 |
| XM_034299265.1 | mRNA | downstream | 95094 | 1701313 ~ 1710902 (-) | False | LOC117595719 |
| XM_026939849.2 | mRNA | downstream | 247472 | 1535595 ~ 1558524 (-) | True | slc6a4b |
| XM_034299296.1 | mRNA | downstream | 293654 | 1505640 ~ 1512342 (-) | False | LOC113542373 |
| XM_034299297.1 | mRNA | downstream | 293709 | 1505639 ~ 1512287 (-) | False | LOC113542373 |
| XM_034299249.1 | mRNA | upstream | 8918 | 1951629 ~ 1968139 (-) | True | erap1b |
| XM_034299248.1 | mRNA | upstream | 8918 | 1951629 ~ 1968115 (-) | False | erap1b |
| XM_026940309.2 | mRNA | upstream | 40697 | 1983408 ~ 2127645 (-) | False | arvcfb |
| XM_026940310.2 | mRNA | upstream | 40697 | 1983408 ~ 2127645 (-) | False | arvcfb |
| XM_026940307.2 | mRNA | upstream | 40697 | 1983408 ~ 2061902 (-) | False | arvcfb |
| trnak-uuu_19 | other | downstream | 207454 | 1598470 ~ 1598542 (-) | True | trnak-uuu_19 |
| XR_003404300.2 | other | downstream | 275602 | 1507615 ~ 1530394 (-) | False | LOC113542373 |
| XR_004577143.1 | other | downstream | 275602 | 1528778 ~ 1530394 (-) | False | LOC113542373 |
| XR_003404299.2 | other | downstream | 275608 | 1527592 ~ 1530388 (-) | False | LOC113542373 |
| TU412381 | other | downstream | 436534 | 1356568 ~ 1369462 (-) | False | LOC113524988 |
| TU412577 | other | upstream | 53191 | 1995902 ~ 1998470 (-) | True | G348145 |
| TU412644 | other | upstream | 236832 | 2179543 ~ 2185944 (-) | False | LOC113542580 |
| TU412645 | other | upstream | 236832 | 2179543 ~ 2231567 (-) | False | LOC113542580 |
| TU412757 | other | upstream | 695044 | 2637755 ~ 2664375 (-) | False | zmat4a |
| TU412979 | other | upstream | 841966 | 2784677 ~ 2785896 (-) | True | G348491 |
