Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU412579 |
| length | 280 |
| lncRNA type | intronic |
| GC content | 0.43 |
| exon number | 2 |
| gene id | G348147 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047618.1 |
| NCBI id | CM018564.1 |
| chromosome length | 20251756 |
| location | 2033557 ~ 2033864 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU412516 | lncRNA | downstream | 12422 | 1982054 ~ 2021135 (-) | False | arvcfb |
| TU412574 | lncRNA | downstream | 46510 | 1986183 ~ 1987047 (-) | True | G348143 |
| TU412511 | lncRNA | downstream | 90846 | 1805996 ~ 1942711 (-) | True | G348103 |
| TU412497 | lncRNA | downstream | 157801 | 1794830 ~ 1875756 (-) | True | G348094 |
| TU412483 | lncRNA | downstream | 162411 | 1790117 ~ 1871146 (-) | True | G348092 |
| TU412614 | lncRNA | upstream | 77799 | 2111663 ~ 2181860 (-) | True | G348180 |
| TU412635 | lncRNA | upstream | 107752 | 2141616 ~ 2142102 (-) | True | G348200 |
| XR_004577113.1 | lncRNA | upstream | 208344 | 2242208 ~ 2242816 (-) | True | LOC117595926 |
| TU412672 | lncRNA | upstream | 272261 | 2306125 ~ 2308604 (-) | True | G348233 |
| TU412719 | lncRNA | upstream | 366993 | 2400857 ~ 2401493 (-) | True | G348264 |
| XM_034299249.1 | mRNA | downstream | 65418 | 1951629 ~ 1968139 (-) | True | erap1b |
| XM_034299248.1 | mRNA | downstream | 65442 | 1951629 ~ 1968115 (-) | False | erap1b |
| XM_026939931.2 | mRNA | downstream | 125984 | 1901159 ~ 1907573 (-) | True | rad17 |
| XM_026939612.2 | mRNA | downstream | 133493 | 1892269 ~ 1900064 (-) | True | ccdc125 |
| XM_034299260.1 | mRNA | downstream | 135144 | 1892268 ~ 1898413 (-) | False | ccdc125 |
| XM_034299307.1 | mRNA | upstream | 123122 | 2156986 ~ 2163920 (-) | True | rnf181 |
| XM_026940198.2 | mRNA | upstream | 130609 | 2164473 ~ 2166382 (-) | False | LOC113542577 |
| XM_026940201.2 | mRNA | upstream | 130609 | 2164473 ~ 2166382 (-) | False | LOC113542577 |
| XM_026940200.2 | mRNA | upstream | 130609 | 2164473 ~ 2166382 (-) | True | LOC113542577 |
| XM_034298933.1 | mRNA | upstream | 135471 | 2169335 ~ 2177813 (-) | True | LOC113542514 |
| TU412577 | other | downstream | 35087 | 1995902 ~ 1998470 (-) | True | G348145 |
| TU412500 | other | downstream | 204912 | 1827898 ~ 1828645 (-) | True | G348096 |
| trnak-uuu_19 | other | downstream | 435015 | 1598470 ~ 1598542 (-) | True | trnak-uuu_19 |
| XR_003404300.2 | other | downstream | 503163 | 1507615 ~ 1530394 (-) | False | LOC113542373 |
| TU412644 | other | upstream | 145679 | 2179543 ~ 2185944 (-) | False | LOC113542580 |
| TU412645 | other | upstream | 145679 | 2179543 ~ 2231567 (-) | False | LOC113542580 |
| TU412757 | other | upstream | 603891 | 2637755 ~ 2664375 (-) | False | zmat4a |
| TU412979 | other | upstream | 750813 | 2784677 ~ 2785896 (-) | True | G348491 |
| XR_004577129.1 | other | upstream | 780994 | 2814858 ~ 2964889 (-) | False | unc5db |
