Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU412635 |
| length | 463 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 2 |
| gene id | G348200 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047618.1 |
| NCBI id | CM018564.1 |
| chromosome length | 20251756 |
| location | 2141616 ~ 2142102 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU412579 | lncRNA | downstream | 107752 | 2033557 ~ 2033864 (-) | True | G348147 |
| TU412516 | lncRNA | downstream | 120481 | 1982054 ~ 2021135 (-) | False | arvcfb |
| TU412574 | lncRNA | downstream | 154569 | 1986183 ~ 1987047 (-) | True | G348143 |
| TU412511 | lncRNA | downstream | 198905 | 1805996 ~ 1942711 (-) | True | G348103 |
| TU412497 | lncRNA | downstream | 265860 | 1794830 ~ 1875756 (-) | True | G348094 |
| XR_004577113.1 | lncRNA | upstream | 100106 | 2242208 ~ 2242816 (-) | True | LOC117595926 |
| TU412672 | lncRNA | upstream | 164023 | 2306125 ~ 2308604 (-) | True | G348233 |
| TU412719 | lncRNA | upstream | 258755 | 2400857 ~ 2401493 (-) | True | G348264 |
| TU412721 | lncRNA | upstream | 258931 | 2401033 ~ 2401493 (-) | False | G348264 |
| TU412742 | lncRNA | upstream | 281613 | 2423715 ~ 2424331 (-) | True | G348283 |
| XM_026940309.2 | mRNA | downstream | 13971 | 1983408 ~ 2127645 (-) | False | arvcfb |
| XM_026940310.2 | mRNA | downstream | 13971 | 1983408 ~ 2127645 (-) | False | arvcfb |
| XM_026940307.2 | mRNA | downstream | 79714 | 1983408 ~ 2061902 (-) | False | arvcfb |
| XM_026940304.2 | mRNA | downstream | 79714 | 1983408 ~ 2061902 (-) | False | arvcfb |
| XM_026940305.2 | mRNA | downstream | 79715 | 1983408 ~ 2061901 (-) | False | arvcfb |
| XM_034299307.1 | mRNA | upstream | 14884 | 2156986 ~ 2163920 (-) | True | rnf181 |
| XM_026940198.2 | mRNA | upstream | 22371 | 2164473 ~ 2166382 (-) | False | LOC113542577 |
| XM_026940201.2 | mRNA | upstream | 22371 | 2164473 ~ 2166382 (-) | False | LOC113542577 |
| XM_026940200.2 | mRNA | upstream | 22371 | 2164473 ~ 2166382 (-) | True | LOC113542577 |
| XM_034298933.1 | mRNA | upstream | 27233 | 2169335 ~ 2177813 (-) | True | LOC113542514 |
| TU412577 | other | downstream | 143146 | 1995902 ~ 1998470 (-) | True | G348145 |
| TU412500 | other | downstream | 312971 | 1827898 ~ 1828645 (-) | True | G348096 |
| trnak-uuu_19 | other | downstream | 543074 | 1598470 ~ 1598542 (-) | True | trnak-uuu_19 |
| XR_004577143.1 | other | downstream | 611222 | 1528778 ~ 1530394 (-) | False | LOC113542373 |
| XR_003404299.2 | other | downstream | 611228 | 1527592 ~ 1530388 (-) | False | LOC113542373 |
| TU412644 | other | upstream | 37441 | 2179543 ~ 2185944 (-) | False | LOC113542580 |
| TU412645 | other | upstream | 37441 | 2179543 ~ 2231567 (-) | False | LOC113542580 |
| TU412757 | other | upstream | 495653 | 2637755 ~ 2664375 (-) | False | zmat4a |
| TU412979 | other | upstream | 642575 | 2784677 ~ 2785896 (-) | True | G348491 |
| XR_004577129.1 | other | upstream | 672756 | 2814858 ~ 2964889 (-) | False | unc5db |
