Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU412719 |
| length | 637 |
| lncRNA type | inter_gene |
| GC content | 0.51 |
| exon number | 1 |
| gene id | G348264 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047618.1 |
| NCBI id | CM018564.1 |
| chromosome length | 20251756 |
| location | 2400857 ~ 2401493 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU412672 | lncRNA | downstream | 92253 | 2306125 ~ 2308604 (-) | True | G348233 |
| XR_004577113.1 | lncRNA | downstream | 158041 | 2242208 ~ 2242816 (-) | True | LOC117595926 |
| TU412614 | lncRNA | downstream | 218997 | 2111663 ~ 2181860 (-) | True | G348180 |
| TU412635 | lncRNA | downstream | 258755 | 2141616 ~ 2142102 (-) | True | G348200 |
| TU412579 | lncRNA | downstream | 366993 | 2033557 ~ 2033864 (-) | True | G348147 |
| TU412742 | lncRNA | upstream | 22222 | 2423715 ~ 2424331 (-) | True | G348283 |
| TU412771 | lncRNA | upstream | 143922 | 2545415 ~ 2546515 (-) | True | G348309 |
| TU412772 | lncRNA | upstream | 145079 | 2546572 ~ 2548040 (-) | True | G348310 |
| TU412773 | lncRNA | upstream | 146630 | 2548123 ~ 2549010 (-) | True | G348311 |
| TU412758 | lncRNA | upstream | 147604 | 2549097 ~ 2594323 (-) | True | G348296 |
| XM_026940273.2 | mRNA | downstream | 37702 | 2357271 ~ 2363155 (-) | True | ogfod2 |
| XM_034299099.1 | mRNA | downstream | 117864 | 2252981 ~ 2282993 (-) | False | tacr1a |
| XM_026939880.2 | mRNA | downstream | 117865 | 2252981 ~ 2282992 (-) | True | tacr1a |
| XM_034299412.1 | mRNA | downstream | 191116 | 2201716 ~ 2209741 (-) | False | ncaph |
| XM_034299411.1 | mRNA | downstream | 191116 | 2201716 ~ 2209741 (-) | True | ncaph |
| XM_026940243.2 | mRNA | upstream | 33831 | 2435324 ~ 2458405 (-) | True | LOC113542614 |
| XM_026940065.2 | mRNA | upstream | 64079 | 2465572 ~ 2482183 (-) | True | LOC113542490 |
| XM_026939656.2 | mRNA | upstream | 200041 | 2601534 ~ 2664482 (-) | True | zmat4a |
| XM_026939548.2 | mRNA | upstream | 299504 | 2700997 ~ 2712386 (-) | True | sfrp1a |
| XM_034299212.1 | mRNA | upstream | 344654 | 2746147 ~ 2773403 (-) | True | loxl2b |
| TU412645 | other | downstream | 169290 | 2179543 ~ 2231567 (-) | False | LOC113542580 |
| TU412644 | other | downstream | 214913 | 2179543 ~ 2185944 (-) | False | LOC113542580 |
| TU412577 | other | downstream | 402387 | 1995902 ~ 1998470 (-) | True | G348145 |
| TU412500 | other | downstream | 572212 | 1827898 ~ 1828645 (-) | True | G348096 |
| trnak-uuu_19 | other | downstream | 802315 | 1598470 ~ 1598542 (-) | True | trnak-uuu_19 |
| TU412757 | other | upstream | 236262 | 2637755 ~ 2664375 (-) | False | zmat4a |
| TU412979 | other | upstream | 383184 | 2784677 ~ 2785896 (-) | True | G348491 |
| XR_004577129.1 | other | upstream | 413365 | 2814858 ~ 2964889 (-) | False | unc5db |
| XR_003404311.2 | other | upstream | 754549 | 3156042 ~ 3166254 (-) | False | tm2d2 |
| XR_004577114.1 | other | upstream | 944662 | 3346155 ~ 3387730 (-) | False | trpm3 |
