Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU413212 |
| length | 571 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 1 |
| gene id | G348695 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047618.1 |
| NCBI id | CM018564.1 |
| chromosome length | 20251756 |
| location | 3315374 ~ 3315944 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU413196 | lncRNA | downstream | 50552 | 3262269 ~ 3264822 (-) | True | G348681 |
| TU413193 | lncRNA | downstream | 56322 | 3256110 ~ 3259052 (-) | True | G348678 |
| TU413177 | lncRNA | downstream | 91875 | 3223300 ~ 3223499 (-) | True | G348669 |
| TU413169 | lncRNA | downstream | 107540 | 3205505 ~ 3207834 (-) | True | G348662 |
| TU413170 | lncRNA | downstream | 110090 | 3204091 ~ 3205284 (-) | True | G348663 |
| TU413444 | lncRNA | upstream | 234633 | 3550577 ~ 3551672 (-) | True | G348906 |
| TU413450 | lncRNA | upstream | 245722 | 3561666 ~ 3607376 (-) | False | LOC117595903 |
| TU413448 | lncRNA | upstream | 280849 | 3596793 ~ 3607376 (-) | True | LOC117595903 |
| XR_004577093.1 | lncRNA | upstream | 283715 | 3599659 ~ 3607371 (-) | False | LOC117595903 |
| TU413447 | lncRNA | upstream | 299127 | 3615071 ~ 3616581 (-) | True | G348909 |
| XM_034299051.1 | mRNA | downstream | 2518 | 3307168 ~ 3312856 (-) | False | klf9 |
| XM_026939927.2 | mRNA | downstream | 2518 | 3307168 ~ 3312856 (-) | True | klf9 |
| XM_026939936.2 | mRNA | downstream | 72533 | 3229104 ~ 3242841 (-) | False | araf |
| XM_034299002.1 | mRNA | downstream | 72610 | 3229104 ~ 3242764 (-) | False | araf |
| XM_034299003.1 | mRNA | downstream | 72783 | 3229104 ~ 3242591 (-) | True | araf |
| XM_034299101.1 | mRNA | upstream | 3841 | 3319785 ~ 3387730 (-) | False | trpm3 |
| XM_034299100.1 | mRNA | upstream | 3841 | 3319785 ~ 3387730 (-) | True | trpm3 |
| XM_034299102.1 | mRNA | upstream | 3841 | 3319785 ~ 3361403 (-) | False | trpm3 |
| XM_034299103.1 | mRNA | upstream | 3841 | 3319785 ~ 3357001 (-) | False | trpm3 |
| XM_026939819.2 | mRNA | upstream | 195171 | 3511115 ~ 3546480 (-) | False | cemip2 |
| XR_003404311.2 | other | downstream | 149120 | 3156042 ~ 3166254 (-) | False | tm2d2 |
| XR_004577129.1 | other | downstream | 350485 | 2814858 ~ 2964889 (-) | False | unc5db |
| TU412979 | other | downstream | 529478 | 2784677 ~ 2785896 (-) | True | G348491 |
| TU412757 | other | downstream | 650999 | 2637755 ~ 2664375 (-) | False | zmat4a |
| TU412645 | other | downstream | 1083807 | 2179543 ~ 2231567 (-) | False | LOC113542580 |
| XR_004577114.1 | other | upstream | 30211 | 3346155 ~ 3387730 (-) | False | trpm3 |
| TU414275 | other | upstream | 1223339 | 4539283 ~ 4539831 (-) | True | G349584 |
| TU414706 | other | upstream | 2005569 | 5321513 ~ 5364282 (-) | True | G349951 |
| TU414705 | other | upstream | 2046338 | 5362282 ~ 5367010 (-) | False | LOC113542328 |
| XR_004577106.1 | other | upstream | 2260676 | 5576620 ~ 5578981 (-) | False | LOC117595919 |
