Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU414275 |
| length | 465 |
| RNA type | TUCP |
| GC content | 0.57 |
| exon number | 2 |
| gene id | G349584 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047618.1 |
| NCBI id | CM018564.1 |
| chromosome length | 20251756 |
| location | 4539283 ~ 4539831 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU414221 | lncRNA | downstream | 27271 | 4464174 ~ 4512012 (-) | True | G349547 |
| TU414019 | lncRNA | downstream | 335179 | 3882016 ~ 4204104 (-) | False | carnmt1 |
| TU414009 | lncRNA | downstream | 705077 | 3832085 ~ 3834206 (-) | False | trpm6 |
| TU413957 | lncRNA | downstream | 817264 | 3718239 ~ 3722019 (-) | True | G349333 |
| TU413943 | lncRNA | downstream | 841759 | 3695478 ~ 3697524 (-) | True | G349325 |
| TU414369 | lncRNA | upstream | 163562 | 4703393 ~ 4704166 (-) | True | G349655 |
| TU414350 | lncRNA | upstream | 237199 | 4777030 ~ 4786024 (-) | True | G349642 |
| TU414540 | lncRNA | upstream | 466445 | 5006276 ~ 5006649 (-) | True | G349805 |
| TU414547 | lncRNA | upstream | 478275 | 5018106 ~ 5018675 (-) | True | G349812 |
| XR_004577095.1 | lncRNA | upstream | 515511 | 5055342 ~ 5060388 (-) | True | LOC117595908 |
| XM_026940261.2 | mRNA | downstream | 3804 | 4530121 ~ 4535479 (-) | True | alkbh2 |
| XM_034299325.1 | mRNA | downstream | 3820 | 4530121 ~ 4535463 (-) | False | alkbh2 |
| XM_034299324.1 | mRNA | downstream | 4301 | 4530121 ~ 4534982 (-) | False | alkbh2 |
| XM_034299323.1 | mRNA | downstream | 4307 | 4530121 ~ 4534976 (-) | False | alkbh2 |
| XM_034299326.1 | mRNA | downstream | 4327 | 4530121 ~ 4534956 (-) | False | alkbh2 |
| XM_026939622.2 | mRNA | upstream | 173316 | 4713147 ~ 4729093 (-) | True | selenom |
| XM_026939879.2 | mRNA | upstream | 250037 | 4789868 ~ 4796995 (-) | True | c24h2orf68 |
| XM_026939878.2 | mRNA | upstream | 267619 | 4807450 ~ 4815249 (-) | True | sftpbb |
| XM_034299041.1 | mRNA | upstream | 286132 | 4825963 ~ 4930853 (-) | True | ank1a |
| XM_026939980.2 | mRNA | upstream | 408121 | 4947952 ~ 4974098 (-) | True | ebf2 |
| XR_004577114.1 | other | downstream | 1151553 | 3346155 ~ 3387730 (-) | False | trpm3 |
| XR_003404311.2 | other | downstream | 1373029 | 3156042 ~ 3166254 (-) | False | tm2d2 |
| XR_004577129.1 | other | downstream | 1574394 | 2814858 ~ 2964889 (-) | False | unc5db |
| TU412979 | other | downstream | 1753387 | 2784677 ~ 2785896 (-) | True | G348491 |
| TU412757 | other | downstream | 1874908 | 2637755 ~ 2664375 (-) | False | zmat4a |
| TU414706 | other | upstream | 781682 | 5321513 ~ 5364282 (-) | True | G349951 |
| TU414705 | other | upstream | 822451 | 5362282 ~ 5367010 (-) | False | LOC113542328 |
| XR_004577106.1 | other | upstream | 1036789 | 5576620 ~ 5578981 (-) | False | LOC117595919 |
| XR_004577154.1 | other | upstream | 1517150 | 6056981 ~ 6120959 (-) | True | pappab |
| XR_004577155.1 | other | upstream | 1517404 | 6057235 ~ 6120959 (-) | False | pappab |
