Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU414695 |
| length | 345 |
| lncRNA type | sense_over |
| GC content | 0.49 |
| exon number | 2 |
| gene id | G349949 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047618.1 |
| NCBI id | CM018564.1 |
| chromosome length | 20251756 |
| location | 5264852 ~ 5275075 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU414580 | lncRNA | downstream | 125026 | 5139594 ~ 5139826 (-) | True | G349844 |
| TU414579 | lncRNA | downstream | 125635 | 5138944 ~ 5139217 (-) | True | G349843 |
| TU414546 | lncRNA | downstream | 138035 | 5115816 ~ 5126817 (-) | True | G349811 |
| TU414569 | lncRNA | downstream | 154549 | 5109055 ~ 5110303 (-) | True | G349833 |
| TU414568 | lncRNA | downstream | 160562 | 5104030 ~ 5104290 (-) | True | G349832 |
| TU414693 | lncRNA | upstream | 47825 | 5322900 ~ 5327500 (-) | False | hip1rb |
| TU414717 | lncRNA | upstream | 236605 | 5511680 ~ 5514809 (-) | True | G349959 |
| TU414718 | lncRNA | upstream | 242797 | 5517872 ~ 5518291 (-) | True | G349960 |
| TU414824 | lncRNA | upstream | 366810 | 5641885 ~ 5642417 (-) | True | G350057 |
| TU414825 | lncRNA | upstream | 367366 | 5642441 ~ 5645072 (-) | True | G350058 |
| XM_034299369.1 | mRNA | downstream | 31035 | 5232083 ~ 5233817 (-) | True | LOC117595987 |
| XM_026939916.2 | mRNA | downstream | 163358 | 5084057 ~ 5101494 (-) | True | kmt5ab |
| XM_034299132.1 | mRNA | downstream | 248437 | 5007202 ~ 5016415 (-) | True | mob1a |
| XM_026940023.2 | mRNA | downstream | 251543 | 5007202 ~ 5013309 (-) | False | mob1a |
| XM_026939573.2 | mRNA | downstream | 260477 | 5000023 ~ 5004375 (-) | True | dguok |
| XM_026939767.2 | mRNA | upstream | 90638 | 5365713 ~ 5523281 (-) | False | LOC113542328 |
| XM_026939764.2 | mRNA | upstream | 90638 | 5365713 ~ 5523281 (-) | False | LOC113542328 |
| XM_026939765.2 | mRNA | upstream | 90638 | 5365713 ~ 5523281 (-) | False | LOC113542328 |
| XM_026939763.2 | mRNA | upstream | 90638 | 5365713 ~ 5523281 (-) | True | LOC113542328 |
| XM_026939766.2 | mRNA | upstream | 95493 | 5370568 ~ 5523281 (-) | False | LOC113542328 |
| TU414275 | other | downstream | 725021 | 4539283 ~ 4539831 (-) | True | G349584 |
| XR_004577114.1 | other | downstream | 1877122 | 3346155 ~ 3387730 (-) | False | trpm3 |
| XR_003404311.2 | other | downstream | 2098598 | 3156042 ~ 3166254 (-) | False | tm2d2 |
| XR_004577129.1 | other | downstream | 2299963 | 2814858 ~ 2964889 (-) | False | unc5db |
| TU412979 | other | downstream | 2478956 | 2784677 ~ 2785896 (-) | True | G348491 |
| TU414706 | other | upstream | 46438 | 5321513 ~ 5364282 (-) | True | G349951 |
| TU414705 | other | upstream | 87207 | 5362282 ~ 5367010 (-) | False | LOC113542328 |
| XR_004577106.1 | other | upstream | 301545 | 5576620 ~ 5578981 (-) | False | LOC117595919 |
| XR_004577154.1 | other | upstream | 781906 | 6056981 ~ 6120959 (-) | True | pappab |
| XR_004577155.1 | other | upstream | 782160 | 6057235 ~ 6120959 (-) | False | pappab |
