Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026940204.2 |
| length | 858 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 3 |
| gene id | LOC113542514 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047618.1 |
| NCBI id | CM018564.1 |
| chromosome length | 20251756 |
| location | 2169335 ~ 2178059 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0016020 | membrane | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU412635 | lncRNA | downstream | 33435 | 2141616 ~ 2142102 (-) | True | G348200 |
| TU412579 | lncRNA | downstream | 141673 | 2033557 ~ 2033864 (-) | True | G348147 |
| TU412516 | lncRNA | downstream | 154402 | 1982054 ~ 2021135 (-) | False | arvcfb |
| TU412574 | lncRNA | downstream | 188490 | 1986183 ~ 1987047 (-) | True | G348143 |
| TU412511 | lncRNA | downstream | 232826 | 1805996 ~ 1942711 (-) | True | G348103 |
| XR_004577113.1 | lncRNA | upstream | 64149 | 2242208 ~ 2242816 (-) | True | LOC117595926 |
| TU412672 | lncRNA | upstream | 128066 | 2306125 ~ 2308604 (-) | True | G348233 |
| TU412719 | lncRNA | upstream | 222798 | 2400857 ~ 2401493 (-) | True | G348264 |
| TU412721 | lncRNA | upstream | 222974 | 2401033 ~ 2401493 (-) | False | G348264 |
| TU412742 | lncRNA | upstream | 245656 | 2423715 ~ 2424331 (-) | True | G348283 |
| XM_026940098.2 | mRNA | downstream | 2596 | 2169335 ~ 2172941 (-) | False | LOC113542514 |
| XM_026940198.2 | mRNA | downstream | 9155 | 2164473 ~ 2166382 (-) | False | LOC113542577 |
| XM_026940201.2 | mRNA | downstream | 9155 | 2164473 ~ 2166382 (-) | False | LOC113542577 |
| XM_026940200.2 | mRNA | downstream | 9155 | 2164473 ~ 2166382 (-) | True | LOC113542577 |
| XM_034299307.1 | mRNA | downstream | 11617 | 2156986 ~ 2163920 (-) | True | rnf181 |
| XM_026940205.2 | mRNA | upstream | 1480 | 2179539 ~ 2186080 (-) | True | LOC113542580 |
| XM_026939754.2 | mRNA | upstream | 13526 | 2191585 ~ 2199551 (-) | True | vamp8 |
| XM_034299412.1 | mRNA | upstream | 23657 | 2201716 ~ 2209741 (-) | False | ncaph |
| XM_034299411.1 | mRNA | upstream | 23657 | 2201716 ~ 2209741 (-) | True | ncaph |
| XM_034299099.1 | mRNA | upstream | 74922 | 2252981 ~ 2282993 (-) | False | tacr1a |
| TU412577 | other | downstream | 177067 | 1995902 ~ 1998470 (-) | True | G348145 |
| TU412500 | other | downstream | 346892 | 1827898 ~ 1828645 (-) | True | G348096 |
| trnak-uuu_19 | other | downstream | 576995 | 1598470 ~ 1598542 (-) | True | trnak-uuu_19 |
| XR_004577143.1 | other | downstream | 645143 | 1528778 ~ 1530394 (-) | False | LOC113542373 |
| XR_003404299.2 | other | downstream | 645149 | 1527592 ~ 1530388 (-) | False | LOC113542373 |
| TU412644 | other | upstream | 1484 | 2179543 ~ 2185944 (-) | False | LOC113542580 |
| TU412645 | other | upstream | 1484 | 2179543 ~ 2231567 (-) | False | LOC113542580 |
| TU412757 | other | upstream | 459696 | 2637755 ~ 2664375 (-) | False | zmat4a |
| TU412979 | other | upstream | 606618 | 2784677 ~ 2785896 (-) | True | G348491 |
| XR_004577129.1 | other | upstream | 636799 | 2814858 ~ 2964889 (-) | False | unc5db |
