Item | Value |
---|---|
RNA id | XM_034298972.1 |
length | 1547 |
RNA type | mRNA |
GC content | 0.44 |
exon number | 5 |
gene id | LOC113524950 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047618.1 |
NCBI id | CM018564.1 |
chromosome length | 20251756 |
location | 73680 ~ 80350 (-) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
id | description |
---|---|
ko04141 | Protein processing in endoplasmic reticulum |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU411870 | lncRNA | downstream | 38902 | 17440 ~ 34778 (-) | True | G347634 |
TU411888 | lncRNA | upstream | 39959 | 120309 ~ 138813 (-) | True | G347652 |
TU411860 | lncRNA | upstream | 58864 | 139214 ~ 141057 (-) | False | LOC117595978 |
TU411853 | lncRNA | upstream | 94673 | 175023 ~ 206293 (-) | True | G347623 |
TU411951 | lncRNA | upstream | 248564 | 328914 ~ 329608 (-) | True | G347703 |
TU411952 | lncRNA | upstream | 252892 | 333242 ~ 333755 (-) | True | G347704 |
XM_034299331.1 | mRNA | downstream | 2196 | 61601 ~ 71484 (-) | False | paip1 |
XM_034298970.1 | mRNA | upstream | 6109 | 86459 ~ 91869 (-) | True | LOC113525747 |
XM_034298969.1 | mRNA | upstream | 15106 | 95456 ~ 116505 (-) | True | LOC117595914 |
XM_034299335.1 | mRNA | upstream | 37848 | 118198 ~ 149806 (-) | True | LOC117595978 |
XM_034298968.1 | mRNA | upstream | 38832 | 119182 ~ 122661 (-) | True | LOC117595913 |
XM_034298967.1 | mRNA | upstream | 46640 | 126990 ~ 134539 (-) | True | LOC117595912 |
TU411851 | other | upstream | 6313 | 86663 ~ 99662 (-) | True | G347621 |
TU411864 | other | upstream | 7217 | 87567 ~ 125206 (-) | True | G347628 |
TU411852 | other | upstream | 15013 | 95363 ~ 121111 (-) | True | G347622 |
TU411899 | other | upstream | 117042 | 197392 ~ 201961 (-) | False | LOC117595911 |
TU411849 | other | upstream | 126143 | 206493 ~ 210642 (-) | False | LOC113528266 |