Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034299298.1 |
| length | 945 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 9 |
| gene id | LOC117595672 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047618.1 |
| NCBI id | CM018564.1 |
| chromosome length | 20251756 |
| location | 1086342 ~ 1108648 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU412231 | lncRNA | downstream | 12641 | 1056423 ~ 1073701 (-) | False | G347896 |
| TU412318 | lncRNA | downstream | 48145 | 1036539 ~ 1038197 (-) | False | G347955 |
| TU412317 | lncRNA | downstream | 49010 | 1036539 ~ 1037332 (-) | True | G347955 |
| TU412274 | lncRNA | downstream | 161675 | 917601 ~ 924667 (-) | False | LOC113527995 |
| XR_004577124.1 | lncRNA | downstream | 249004 | 830810 ~ 837338 (-) | False | LOC117595934 |
| TU412335 | lncRNA | upstream | 6071 | 1095034 ~ 1277213 (-) | True | G347969 |
| TU412347 | lncRNA | upstream | 85154 | 1174117 ~ 1177170 (-) | True | G347980 |
| TU412370 | lncRNA | upstream | 138163 | 1227126 ~ 1334937 (-) | True | G348001 |
| TU412372 | lncRNA | upstream | 142272 | 1231235 ~ 1231841 (-) | True | G348003 |
| XR_004577150.1 | lncRNA | upstream | 175842 | 1264805 ~ 1266121 (-) | True | LOC117595969 |
| XM_026911376.2 | mRNA | downstream | 76748 | 1005640 ~ 1009594 (-) | True | kctd10 |
| XM_034299288.1 | mRNA | downstream | 77278 | 1005640 ~ 1009064 (-) | False | kctd10 |
| XM_026911375.2 | mRNA | downstream | 105653 | 976948 ~ 980689 (-) | True | foxn4 |
| XM_034299229.1 | mRNA | downstream | 161719 | 856780 ~ 924623 (-) | False | LOC113527995 |
| XM_034299300.1 | mRNA | upstream | 16957 | 1105920 ~ 1108648 (-) | True | LOC117595672 |
| XM_034299256.1 | mRNA | upstream | 99961 | 1188924 ~ 1230648 (-) | False | tchp |
| XM_026911379.2 | mRNA | upstream | 99961 | 1188924 ~ 1230648 (-) | False | tchp |
| XM_026911382.2 | mRNA | upstream | 99961 | 1188924 ~ 1230648 (-) | True | tchp |
| XM_026911381.2 | mRNA | upstream | 99961 | 1188924 ~ 1194558 (-) | False | tchp |
| TU412323 | other | downstream | 7203 | 1076733 ~ 1079139 (-) | True | G347960 |
| XR_004577138.1 | other | downstream | 161719 | 864220 ~ 924623 (-) | False | LOC113527995 |
| TU411959 | other | downstream | 718607 | 364006 ~ 367735 (-) | True | LOC113528009 |
| XR_004577111.1 | other | downstream | 849070 | 230525 ~ 237272 (-) | False | LOC117595925 |
| TU412226 | other | upstream | 68828 | 1157791 ~ 1410675 (-) | False | G347896 |
| TU412230 | other | upstream | 68828 | 1157791 ~ 1297906 (-) | False | G347896 |
| TU412381 | other | upstream | 267605 | 1356568 ~ 1369462 (-) | False | LOC113524988 |
| XR_003404300.2 | other | upstream | 418652 | 1507615 ~ 1530394 (-) | False | LOC113542373 |
| XR_003404299.2 | other | upstream | 438629 | 1527592 ~ 1530388 (-) | False | LOC113542373 |
