RNA id: TCONS_00008102


Basic Information

Item Value
RNA id TCONS_00008102
length 119
RNA type rRNA
GC content 0.61
exon number 1
gene id XLOC_004245
representative True

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 34355544 ~ 34355662 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

gccggcagctagctctctgcaactctcacatggttgcccagtGAAGCTAGACAGGGCTGCGcctgcctggtcagtacctggatgggagaccacatgggaaagctaggttgctgccggca

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000118591

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00008101 lncRNA downstream 100324 34249456 ~ 34255220 (-) True XLOC_004243
TCONS_00008100 lncRNA downstream 129746 34222893 ~ 34225798 (-) True XLOC_004242
TCONS_00008099 lncRNA downstream 129987 34220350 ~ 34225557 (-) False XLOC_004242
TCONS_00008482 lncRNA downstream 362397 33992033 ~ 33993147 (-) True XLOC_004235
TCONS_00008832 lncRNA downstream 666595 33676834 ~ 33688949 (-) True XLOC_004229
TCONS_00008834 lncRNA upstream 195185 34550847 ~ 34577001 (-) False XLOC_004249
TCONS_00008835 lncRNA upstream 1082351 35438013 ~ 35441417 (-) True XLOC_004255
TCONS_00008836 lncRNA upstream 1223068 35578730 ~ 35741441 (-) False XLOC_004257
TCONS_00008483 lncRNA upstream 1224195 35579857 ~ 35585628 (-) False XLOC_004257
TCONS_00008484 lncRNA upstream 1308889 35664551 ~ 35741440 (-) False XLOC_004257
TCONS_00008098 mRNA downstream 122638 34219991 ~ 34232906 (-) False XLOC_004242
TCONS_00008097 mRNA downstream 136333 34201183 ~ 34219211 (-) True XLOC_004241
TCONS_00008095 mRNA downstream 167198 34154593 ~ 34188346 (-) False XLOC_004240
TCONS_00008096 mRNA downstream 188584 34158178 ~ 34166960 (-) True XLOC_004240
TCONS_00008094 mRNA downstream 204057 34151177 ~ 34151487 (-) True XLOC_004239
TCONS_00008103 mRNA upstream 45798 34401460 ~ 34480822 (-) False XLOC_004246
TCONS_00008104 mRNA upstream 46754 34402416 ~ 34478225 (-) True XLOC_004246
TCONS_00008106 mRNA upstream 133207 34488869 ~ 34522249 (-) False XLOC_004248
TCONS_00008107 mRNA upstream 133748 34489410 ~ 34518362 (-) False XLOC_004248
TCONS_00008108 mRNA upstream 133748 34489410 ~ 34521342 (-) True XLOC_004248
TCONS_00008088 other downstream 389272 33966158 ~ 33966272 (-) True XLOC_004234
TCONS_00008078 other downstream 984177 33371251 ~ 33371367 (-) True XLOC_004227
TCONS_00008075 other downstream 1617951 32731165 ~ 32737593 (-) True XLOC_004221
TCONS_00008067 other downstream 3183290 31170349 ~ 31172254 (-) True XLOC_004210
TCONS_00008056 other downstream 3846753 30424226 ~ 30508791 (-) True XLOC_004205
TCONS_00008105 other upstream 110733 34466395 ~ 34466513 (-) True XLOC_004247
TCONS_00008119 other upstream 869360 35225022 ~ 35225139 (-) True XLOC_004254
TCONS_00008174 other upstream 2943709 37299371 ~ 37299485 (-) True XLOC_004279
TCONS_00008194 other upstream 3819409 38175071 ~ 38175150 (-) True XLOC_004294
TCONS_00008207 other upstream 4592325 38947987 ~ 38949751 (-) True XLOC_004305