Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU437849 |
| length | 434 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G369617 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 1853349 ~ 1853782 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU437804 | lncRNA | downstream | 26285 | 1824204 ~ 1827064 (-) | True | mdh1b |
| TU437802 | lncRNA | downstream | 29845 | 1785553 ~ 1823504 (-) | True | G369573 |
| TU437828 | lncRNA | downstream | 48047 | 1803109 ~ 1805302 (-) | True | G369596 |
| TU437818 | lncRNA | downstream | 58125 | 1776319 ~ 1795224 (-) | False | G369586 |
| TU437747 | lncRNA | downstream | 241683 | 1541490 ~ 1611666 (-) | False | nrp2a |
| TU437853 | lncRNA | upstream | 658 | 1854440 ~ 1854653 (-) | True | G369618 |
| TU437880 | lncRNA | upstream | 34722 | 1888504 ~ 1889374 (-) | True | G369641 |
| TU437914 | lncRNA | upstream | 164933 | 2018715 ~ 2021315 (-) | True | G369663 |
| TU437910 | lncRNA | upstream | 165136 | 2018918 ~ 2021315 (-) | False | G369663 |
| XR_004577364.1 | lncRNA | upstream | 261796 | 2115578 ~ 2144451 (-) | True | LOC117596194 |
| XM_034300044.1 | mRNA | downstream | 20620 | 1826145 ~ 1832729 (-) | False | mdh1b |
| XM_034300043.1 | mRNA | downstream | 20620 | 1826242 ~ 1832729 (-) | False | mdh1b |
| XM_034300163.1 | mRNA | downstream | 114414 | 1618820 ~ 1738935 (-) | True | pard3ba |
| XM_034300165.1 | mRNA | downstream | 253605 | 1541362 ~ 1599744 (-) | True | nrp2a |
| XM_034300164.1 | mRNA | downstream | 253607 | 1538453 ~ 1599742 (-) | False | nrp2a |
| XM_034300370.1 | mRNA | upstream | 41266 | 1895048 ~ 1909374 (-) | False | LOC113535707 |
| XM_034300371.1 | mRNA | upstream | 41266 | 1895048 ~ 1908127 (-) | False | LOC113535707 |
| XM_034300369.1 | mRNA | upstream | 41266 | 1895048 ~ 1906506 (-) | True | LOC113535707 |
| XM_034300372.1 | mRNA | upstream | 41266 | 1895048 ~ 1902079 (-) | False | LOC113535707 |
| XM_026929215.2 | mRNA | upstream | 61881 | 1915663 ~ 1937075 (-) | True | klf7a |
| TU437816 | other | downstream | 58125 | 1792187 ~ 1795224 (-) | True | G369586 |
| XR_004577318.1 | other | downstream | 253605 | 1541362 ~ 1599744 (-) | False | nrp2a |
| TU437448 | other | downstream | 576536 | 1276021 ~ 1276813 (-) | True | G369242 |
| TU437316 | other | downstream | 937666 | 911553 ~ 915683 (-) | True | G369125 |
| XR_004577324.1 | other | downstream | 1626247 | 202654 ~ 227102 (-) | True | si:dkeyp-75b4.8 |
| XR_003403632.2 | other | upstream | 712975 | 2566757 ~ 2574471 (-) | False | LOC113535702 |
| TU438365 | other | upstream | 989430 | 2843212 ~ 2853211 (-) | True | LOC117596167 |
| XR_003403643.2 | other | upstream | 2603653 | 4457435 ~ 4457541 (-) | True | LOC113535829 |
| XR_004577365.1 | other | upstream | 2605535 | 4459317 ~ 4459423 (-) | True | LOC117596196 |
| XR_004577366.1 | other | upstream | 2607427 | 4461209 ~ 4461315 (-) | True | LOC117596197 |
