Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU438215 |
| length | 848 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 1 |
| gene id | G369926 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 2559213 ~ 2560060 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU438211 | lncRNA | downstream | 404 | 2555979 ~ 2558809 (-) | False | G369924 |
| TU438207 | lncRNA | downstream | 448 | 2555979 ~ 2558765 (-) | True | G369924 |
| TU438209 | lncRNA | downstream | 448 | 2555979 ~ 2558765 (-) | False | G369924 |
| TU438210 | lncRNA | downstream | 448 | 2555979 ~ 2558765 (-) | False | G369924 |
| TU438213 | lncRNA | downstream | 448 | 2555979 ~ 2558765 (-) | False | G369924 |
| TU438217 | lncRNA | upstream | 820 | 2560880 ~ 2562458 (-) | True | G369928 |
| TU438221 | lncRNA | upstream | 2744 | 2562804 ~ 2563537 (-) | True | G369930 |
| TU438216 | lncRNA | upstream | 4652 | 2564712 ~ 2565252 (-) | True | G369927 |
| TU438282 | lncRNA | upstream | 113495 | 2673555 ~ 2678270 (-) | True | G369980 |
| TU438290 | lncRNA | upstream | 134089 | 2694149 ~ 2694577 (-) | True | G369988 |
| XM_026928963.2 | mRNA | downstream | 16347 | 2523115 ~ 2542866 (-) | True | LOC113535562 |
| XM_026928960.2 | mRNA | downstream | 16349 | 2523115 ~ 2542864 (-) | False | LOC113535562 |
| XM_026928961.2 | mRNA | downstream | 16611 | 2523115 ~ 2542602 (-) | False | LOC113535562 |
| XM_026928728.2 | mRNA | downstream | 44195 | 2501030 ~ 2515018 (-) | False | LOC113535442 |
| XM_034299960.1 | mRNA | downstream | 46777 | 2501030 ~ 2512436 (-) | True | LOC113535442 |
| XM_026929206.2 | mRNA | upstream | 6697 | 2566757 ~ 2574471 (-) | True | LOC113535702 |
| XM_026929338.2 | mRNA | upstream | 15390 | 2575450 ~ 2583050 (-) | True | LOC113535812 |
| XM_034300345.1 | mRNA | upstream | 57566 | 2617626 ~ 2633096 (-) | True | efnb2b |
| XM_026929079.2 | mRNA | upstream | 77275 | 2637335 ~ 2642686 (-) | True | cpo |
| XM_034299942.1 | mRNA | upstream | 157997 | 2718057 ~ 2728695 (-) | True | atic |
| TU437816 | other | downstream | 763989 | 1792187 ~ 1795224 (-) | True | G369586 |
| XR_004577318.1 | other | downstream | 959469 | 1541362 ~ 1599744 (-) | False | nrp2a |
| TU437448 | other | downstream | 1282400 | 1276021 ~ 1276813 (-) | True | G369242 |
| TU437316 | other | downstream | 1643530 | 911553 ~ 915683 (-) | True | G369125 |
| XR_004577324.1 | other | downstream | 2332111 | 202654 ~ 227102 (-) | True | si:dkeyp-75b4.8 |
| XR_003403632.2 | other | upstream | 6697 | 2566757 ~ 2574471 (-) | False | LOC113535702 |
| TU438365 | other | upstream | 283152 | 2843212 ~ 2853211 (-) | True | LOC117596167 |
| XR_003403643.2 | other | upstream | 1897375 | 4457435 ~ 4457541 (-) | True | LOC113535829 |
| XR_004577365.1 | other | upstream | 1899257 | 4459317 ~ 4459423 (-) | True | LOC117596196 |
| XR_004577366.1 | other | upstream | 1901149 | 4461209 ~ 4461315 (-) | True | LOC117596197 |
