Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU438290 |
| length | 392 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 2 |
| gene id | G369988 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 2694149 ~ 2694577 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU438282 | lncRNA | downstream | 15879 | 2673555 ~ 2678270 (-) | True | G369980 |
| TU438216 | lncRNA | downstream | 128897 | 2564712 ~ 2565252 (-) | True | G369927 |
| TU438221 | lncRNA | downstream | 130612 | 2562804 ~ 2563537 (-) | True | G369930 |
| TU438217 | lncRNA | downstream | 131691 | 2560880 ~ 2562458 (-) | True | G369928 |
| TU438215 | lncRNA | downstream | 134089 | 2559213 ~ 2560060 (-) | True | G369926 |
| TU438342 | lncRNA | upstream | 76676 | 2771253 ~ 2790054 (-) | False | G370023 |
| TU438341 | lncRNA | upstream | 78049 | 2772626 ~ 2774635 (-) | True | G370023 |
| TU438346 | lncRNA | upstream | 80305 | 2774882 ~ 2775395 (-) | True | G370024 |
| TU438351 | lncRNA | upstream | 88695 | 2783272 ~ 2790676 (-) | True | G370028 |
| TU438334 | lncRNA | upstream | 124026 | 2818603 ~ 2821314 (-) | True | G370019 |
| XM_026929079.2 | mRNA | downstream | 51463 | 2637335 ~ 2642686 (-) | True | cpo |
| XM_034300345.1 | mRNA | downstream | 61053 | 2617626 ~ 2633096 (-) | True | efnb2b |
| XM_026929338.2 | mRNA | downstream | 111099 | 2575450 ~ 2583050 (-) | True | LOC113535812 |
| XM_026929206.2 | mRNA | downstream | 119678 | 2566757 ~ 2574471 (-) | True | LOC113535702 |
| XM_026928961.2 | mRNA | downstream | 151547 | 2523115 ~ 2542602 (-) | False | LOC113535562 |
| XM_034299942.1 | mRNA | upstream | 23480 | 2718057 ~ 2728695 (-) | True | atic |
| XM_026929212.2 | mRNA | upstream | 52691 | 2747268 ~ 2757237 (-) | True | stk16 |
| XM_034300320.1 | mRNA | upstream | 55351 | 2749928 ~ 2757130 (-) | False | stk16 |
| XM_026928808.2 | mRNA | upstream | 64392 | 2758969 ~ 2767493 (-) | True | tuba8l2 |
| XM_034299928.1 | mRNA | upstream | 74052 | 2768629 ~ 2770657 (-) | True | LOC113535758 |
| XR_003403632.2 | other | downstream | 119678 | 2566757 ~ 2574471 (-) | False | LOC113535702 |
| TU437816 | other | downstream | 898925 | 1792187 ~ 1795224 (-) | True | G369586 |
| XR_004577318.1 | other | downstream | 1094405 | 1541362 ~ 1599744 (-) | False | nrp2a |
| TU437448 | other | downstream | 1417336 | 1276021 ~ 1276813 (-) | True | G369242 |
| TU437316 | other | downstream | 1778466 | 911553 ~ 915683 (-) | True | G369125 |
| TU438365 | other | upstream | 148635 | 2843212 ~ 2853211 (-) | True | LOC117596167 |
| XR_003403643.2 | other | upstream | 1762858 | 4457435 ~ 4457541 (-) | True | LOC113535829 |
| XR_004577365.1 | other | upstream | 1764740 | 4459317 ~ 4459423 (-) | True | LOC117596196 |
| XR_004577366.1 | other | upstream | 1766632 | 4461209 ~ 4461315 (-) | True | LOC117596197 |
| XR_004577367.1 | other | upstream | 1768531 | 4463108 ~ 4463214 (-) | True | LOC117596198 |
