Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU438778 |
| length | 754 |
| lncRNA type | inter_gene |
| GC content | 0.31 |
| exon number | 2 |
| gene id | G370415 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 3981710 ~ 3982940 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU438732 | lncRNA | downstream | 204367 | 3777129 ~ 3777343 (-) | True | G370372 |
| TU438674 | lncRNA | downstream | 377125 | 3604354 ~ 3604585 (-) | True | G370327 |
| TU438655 | lncRNA | downstream | 515849 | 3465647 ~ 3465861 (-) | True | G370308 |
| TU438629 | lncRNA | downstream | 751525 | 3229949 ~ 3230185 (-) | True | G370282 |
| TU438619 | lncRNA | downstream | 756475 | 3225020 ~ 3225235 (-) | True | G370272 |
| TU438779 | lncRNA | upstream | 171 | 3983111 ~ 3983579 (-) | True | G370416 |
| TU438781 | lncRNA | upstream | 3265 | 3986205 ~ 3986622 (-) | True | G370418 |
| TU438789 | lncRNA | upstream | 158982 | 4141922 ~ 4142128 (-) | True | G370425 |
| TU438835 | lncRNA | upstream | 463518 | 4446458 ~ 4447106 (-) | True | G370468 |
| TU439062 | lncRNA | upstream | 821940 | 4804880 ~ 4811748 (-) | True | G370665 |
| XM_034299954.1 | mRNA | downstream | 363590 | 3611719 ~ 3618120 (-) | True | LOC113535432 |
| XM_026928713.2 | mRNA | downstream | 364818 | 3611719 ~ 3616892 (-) | False | LOC113535432 |
| XM_026928711.2 | mRNA | downstream | 811225 | 3083070 ~ 3170485 (-) | True | gpc5a |
| XM_034300420.1 | mRNA | downstream | 1089625 | 2874908 ~ 2892085 (-) | True | LOC117596192 |
| XM_026928791.2 | mRNA | downstream | 1142921 | 2833613 ~ 2838789 (-) | True | LOC113535482 |
| XM_034300309.1 | mRNA | upstream | 505209 | 4488149 ~ 4504739 (-) | True | LOC113535753 |
| XM_026928684.2 | mRNA | upstream | 528330 | 4511270 ~ 4517988 (-) | True | cnpy3 |
| XM_026929209.2 | mRNA | upstream | 613490 | 4596430 ~ 4618808 (-) | False | cfap221 |
| XM_026929207.2 | mRNA | upstream | 613490 | 4596430 ~ 4618808 (-) | False | cfap221 |
| XM_026929211.2 | mRNA | upstream | 613490 | 4596430 ~ 4618297 (-) | False | cfap221 |
| TU438365 | other | downstream | 1128499 | 2843212 ~ 2853211 (-) | True | LOC117596167 |
| XR_003403632.2 | other | downstream | 1407239 | 2566757 ~ 2574471 (-) | False | LOC113535702 |
| TU437816 | other | downstream | 2186486 | 1792187 ~ 1795224 (-) | True | G369586 |
| XR_004577318.1 | other | downstream | 2381966 | 1541362 ~ 1599744 (-) | False | nrp2a |
| TU437448 | other | downstream | 2704897 | 1276021 ~ 1276813 (-) | True | G369242 |
| XR_003403643.2 | other | upstream | 474495 | 4457435 ~ 4457541 (-) | True | LOC113535829 |
| XR_004577365.1 | other | upstream | 476377 | 4459317 ~ 4459423 (-) | True | LOC117596196 |
| XR_004577366.1 | other | upstream | 478269 | 4461209 ~ 4461315 (-) | True | LOC117596197 |
| XR_004577367.1 | other | upstream | 480168 | 4463108 ~ 4463214 (-) | True | LOC117596198 |
| XR_004577360.1 | other | upstream | 541562 | 4524502 ~ 4524784 (-) | True | LOC117596183 |
