Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU439112 |
| length | 202 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 1 |
| gene id | G370702 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 5058853 ~ 5059054 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU439109 | lncRNA | downstream | 12607 | 5046040 ~ 5046246 (-) | True | G370699 |
| TU439059 | lncRNA | downstream | 144818 | 4896227 ~ 4914035 (-) | True | G370663 |
| TU439062 | lncRNA | downstream | 247105 | 4804880 ~ 4811748 (-) | True | G370665 |
| TU438835 | lncRNA | downstream | 611747 | 4446458 ~ 4447106 (-) | True | G370468 |
| TU438789 | lncRNA | downstream | 916725 | 4141922 ~ 4142128 (-) | True | G370425 |
| TU439117 | lncRNA | upstream | 3090 | 5062144 ~ 5062436 (-) | True | G370705 |
| TU439118 | lncRNA | upstream | 3500 | 5062554 ~ 5062764 (-) | True | G370706 |
| XR_004577307.1 | lncRNA | upstream | 53699 | 5112753 ~ 5115118 (-) | True | LOC117596137 |
| TU439123 | lncRNA | upstream | 75784 | 5134838 ~ 5135130 (-) | True | G370711 |
| TU439125 | lncRNA | upstream | 77153 | 5136207 ~ 5136693 (-) | True | G370713 |
| XM_026929095.2 | mRNA | downstream | 431612 | 4619201 ~ 4627241 (-) | True | knstrn |
| XM_026929207.2 | mRNA | downstream | 440045 | 4596430 ~ 4618808 (-) | False | cfap221 |
| XM_026932180.2 | mRNA | upstream | 10306 | 5069360 ~ 5112747 (-) | False | brat1 |
| XM_026932179.2 | mRNA | upstream | 10306 | 5069360 ~ 5112747 (-) | True | brat1 |
| XM_026931934.2 | mRNA | upstream | 194639 | 5253693 ~ 5268198 (-) | True | LOC113537465 |
| XM_026931935.1 | mRNA | upstream | 194639 | 5253693 ~ 5258014 (-) | False | LOC113537465 |
| XM_026931936.2 | mRNA | upstream | 210456 | 5269510 ~ 5277092 (-) | True | LOC113537466 |
| TU439054 | other | downstream | 169472 | 4843329 ~ 4889381 (-) | True | G370658 |
| XR_004577360.1 | other | downstream | 534069 | 4524502 ~ 4524784 (-) | True | LOC117596183 |
| XR_004577367.1 | other | downstream | 595639 | 4463108 ~ 4463214 (-) | True | LOC117596198 |
| XR_004577366.1 | other | downstream | 597538 | 4461209 ~ 4461315 (-) | True | LOC117596197 |
| XR_004577365.1 | other | downstream | 599430 | 4459317 ~ 4459423 (-) | True | LOC117596196 |
| XR_004577341.1 | other | upstream | 475361 | 5534415 ~ 5547032 (-) | False | LOC113537235 |
| XR_003403738.2 | other | upstream | 475361 | 5534415 ~ 5547032 (-) | False | LOC113537235 |
| XR_003403737.2 | other | upstream | 475361 | 5534415 ~ 5547032 (-) | False | LOC113537235 |
| XR_003403739.2 | other | upstream | 475361 | 5534415 ~ 5547031 (-) | False | LOC113537235 |
| XR_004577339.1 | other | upstream | 475418 | 5534472 ~ 5547032 (-) | False | LOC113537235 |
