Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU439276 |
| length | 212 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G370837 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 5240065 ~ 5240276 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU439275 | lncRNA | downstream | 2053 | 5236722 ~ 5238012 (-) | True | G370836 |
| XR_003403756.2 | lncRNA | downstream | 48418 | 5190347 ~ 5191647 (-) | True | LOC113537335 |
| TU439215 | lncRNA | downstream | 49765 | 5190075 ~ 5190300 (-) | True | G370784 |
| TU439125 | lncRNA | downstream | 103372 | 5136207 ~ 5136693 (-) | True | G370713 |
| TU439123 | lncRNA | downstream | 104935 | 5134838 ~ 5135130 (-) | True | G370711 |
| TU439284 | lncRNA | upstream | 9556 | 5249832 ~ 5250096 (-) | True | G370845 |
| TU439294 | lncRNA | upstream | 102479 | 5342755 ~ 5343080 (-) | True | G370853 |
| XR_004577333.1 | lncRNA | upstream | 105319 | 5345595 ~ 5365148 (-) | False | LOC113537484 |
| XR_003403765.2 | lncRNA | upstream | 116963 | 5357239 ~ 5365148 (-) | True | LOC113537484 |
| XR_003403766.1 | lncRNA | upstream | 122642 | 5362918 ~ 5365148 (-) | False | LOC113537484 |
| XM_026932180.2 | mRNA | downstream | 127318 | 5069360 ~ 5112747 (-) | False | brat1 |
| XM_026932179.2 | mRNA | downstream | 127318 | 5069360 ~ 5112747 (-) | True | brat1 |
| XM_026929095.2 | mRNA | downstream | 612824 | 4619201 ~ 4627241 (-) | True | knstrn |
| XM_026929208.2 | mRNA | downstream | 621769 | 4596430 ~ 4618296 (-) | True | cfap221 |
| XM_026931934.2 | mRNA | upstream | 13417 | 5253693 ~ 5268198 (-) | True | LOC113537465 |
| XM_026931935.1 | mRNA | upstream | 13417 | 5253693 ~ 5258014 (-) | False | LOC113537465 |
| XM_026931936.2 | mRNA | upstream | 29234 | 5269510 ~ 5277092 (-) | True | LOC113537466 |
| XM_026931937.2 | mRNA | upstream | 29234 | 5269510 ~ 5275402 (-) | False | LOC113537466 |
| XM_026931939.2 | mRNA | upstream | 48409 | 5288685 ~ 5298173 (-) | False | LOC113537467 |
| TU439054 | other | downstream | 350684 | 4843329 ~ 4889381 (-) | True | G370658 |
| XR_004577360.1 | other | downstream | 715281 | 4524502 ~ 4524784 (-) | True | LOC117596183 |
| XR_004577367.1 | other | downstream | 776851 | 4463108 ~ 4463214 (-) | True | LOC117596198 |
| XR_004577366.1 | other | downstream | 778750 | 4461209 ~ 4461315 (-) | True | LOC117596197 |
| XR_004577365.1 | other | downstream | 780642 | 4459317 ~ 4459423 (-) | True | LOC117596196 |
| XR_004577341.1 | other | upstream | 294139 | 5534415 ~ 5547032 (-) | False | LOC113537235 |
| XR_003403738.2 | other | upstream | 294139 | 5534415 ~ 5547032 (-) | False | LOC113537235 |
| XR_003403737.2 | other | upstream | 294139 | 5534415 ~ 5547032 (-) | False | LOC113537235 |
| XR_003403739.2 | other | upstream | 294139 | 5534415 ~ 5547031 (-) | False | LOC113537235 |
| XR_004577339.1 | other | upstream | 294196 | 5534472 ~ 5547032 (-) | False | LOC113537235 |
