Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU439687 |
| length | 627 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G371153 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 5998848 ~ 5999474 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU439686 | lncRNA | downstream | 689 | 5998003 ~ 5998159 (-) | True | G371152 |
| TU439680 | lncRNA | downstream | 4101 | 5993489 ~ 5994747 (-) | True | G371147 |
| TU439651 | lncRNA | downstream | 103160 | 5892326 ~ 5895688 (-) | True | G371121 |
| XR_004577356.1 | lncRNA | downstream | 107051 | 5886846 ~ 5891797 (-) | True | LOC117596178 |
| TU439645 | lncRNA | downstream | 113236 | 5880476 ~ 5885612 (-) | True | G371117 |
| TU439665 | lncRNA | upstream | 1705 | 6001179 ~ 6001613 (-) | True | G371135 |
| TU439664 | lncRNA | upstream | 2364 | 6001838 ~ 6004790 (-) | True | G371134 |
| TU439992 | lncRNA | upstream | 363080 | 6362554 ~ 6363151 (-) | False | LOC113537742 |
| TU440057 | lncRNA | upstream | 529923 | 6529397 ~ 6536004 (-) | True | G371454 |
| TU440098 | lncRNA | upstream | 564375 | 6563849 ~ 6566945 (-) | True | G371487 |
| XM_026931773.2 | mRNA | downstream | 15051 | 5976377 ~ 5983797 (-) | True | blzf1 |
| XM_034300228.1 | mRNA | downstream | 15274 | 5976377 ~ 5983574 (-) | False | blzf1 |
| XM_026932062.2 | mRNA | downstream | 25409 | 5971040 ~ 5973439 (-) | True | txnl4b |
| XM_034300231.1 | mRNA | downstream | 29783 | 5963752 ~ 5969065 (-) | True | mrpl16 |
| XM_026932220.2 | mRNA | downstream | 46535 | 5942039 ~ 5952313 (-) | False | LOC113537623 |
| XM_026932021.2 | mRNA | upstream | 16252 | 6015726 ~ 6033393 (-) | True | tpp2 |
| XM_026932022.2 | mRNA | upstream | 16252 | 6015726 ~ 6033392 (-) | False | tpp2 |
| XM_026932176.2 | mRNA | upstream | 137033 | 6136507 ~ 6160962 (-) | True | LOC113537602 |
| XM_034300227.1 | mRNA | upstream | 162640 | 6162114 ~ 6190394 (-) | True | cenpe |
| XM_026932058.2 | mRNA | upstream | 192154 | 6191628 ~ 6200180 (-) | True | grk1a |
| XR_003403780.2 | other | downstream | 46535 | 5942429 ~ 5952313 (-) | False | LOC113537623 |
| XR_003403737.2 | other | downstream | 451816 | 5534415 ~ 5547032 (-) | False | LOC113537235 |
| XR_004577328.1 | other | upstream | 20213 | 6019687 ~ 6033393 (-) | False | tpp2 |
| XR_004577329.1 | other | upstream | 359165 | 6358639 ~ 6363203 (-) | False | LOC113537742 |
| XR_004577289.1 | other | upstream | 1059361 | 7058835 ~ 7068467 (-) | False | LOC113537271 |
| TU440391 | other | upstream | 1059361 | 7058835 ~ 7068531 (-) | True | LOC113537271 |
| TU440780 | other | upstream | 1718789 | 7718263 ~ 7724795 (-) | True | G372086 |
