Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU439992 |
| length | 292 |
| lncRNA type | sense_over |
| GC content | 0.41 |
| exon number | 2 |
| gene id | LOC113537742 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 6358639 ~ 6363203 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU439664 | lncRNA | downstream | 357764 | 6001838 ~ 6004790 (-) | True | G371134 |
| TU439665 | lncRNA | downstream | 360941 | 6001179 ~ 6001613 (-) | True | G371135 |
| TU439687 | lncRNA | downstream | 363080 | 5998848 ~ 5999474 (-) | True | G371153 |
| TU439686 | lncRNA | downstream | 364395 | 5998003 ~ 5998159 (-) | True | G371152 |
| TU439680 | lncRNA | downstream | 367807 | 5993489 ~ 5994747 (-) | True | G371147 |
| TU440057 | lncRNA | upstream | 166246 | 6529397 ~ 6536004 (-) | True | G371454 |
| TU440098 | lncRNA | upstream | 200698 | 6563849 ~ 6566945 (-) | True | G371487 |
| TU440232 | lncRNA | upstream | 445342 | 6808493 ~ 6815071 (-) | True | G371595 |
| TU440272 | lncRNA | upstream | 504593 | 6867744 ~ 6867960 (-) | True | G371632 |
| TU440266 | lncRNA | upstream | 507421 | 6870572 ~ 6874420 (-) | True | pspc1 |
| XM_034300224.1 | mRNA | downstream | 32279 | 6326777 ~ 6330275 (-) | True | LOC117596162 |
| XM_034300258.1 | mRNA | downstream | 45095 | 6295380 ~ 6317459 (-) | True | cul4a |
| XM_026932227.2 | mRNA | downstream | 69807 | 6279824 ~ 6292747 (-) | True | lamp1a |
| XM_026931930.2 | mRNA | downstream | 123976 | 6226053 ~ 6238578 (-) | True | tmco3 |
| XM_026931690.2 | mRNA | downstream | 139999 | 6203697 ~ 6222555 (-) | False | tfdp1b |
| XM_026932064.2 | mRNA | upstream | 661 | 6363812 ~ 6380175 (-) | False | LOC113537543 |
| XM_026932063.2 | mRNA | upstream | 661 | 6363812 ~ 6368888 (-) | True | LOC113537543 |
| XM_026932065.2 | mRNA | upstream | 9224 | 6372375 ~ 6378994 (-) | True | f7i |
| XM_026932311.2 | mRNA | upstream | 17178 | 6380329 ~ 6384799 (-) | True | f7 |
| XM_026932313.2 | mRNA | upstream | 21748 | 6384899 ~ 6392466 (-) | True | f7l |
| XR_004577328.1 | other | downstream | 329161 | 6019687 ~ 6033393 (-) | False | tpp2 |
| XR_003403780.2 | other | downstream | 410241 | 5942429 ~ 5952313 (-) | False | LOC113537623 |
| XR_003403737.2 | other | downstream | 815522 | 5534415 ~ 5547032 (-) | False | LOC113537235 |
| XR_004577289.1 | other | upstream | 695684 | 7058835 ~ 7068467 (-) | False | LOC113537271 |
| TU440391 | other | upstream | 695684 | 7058835 ~ 7068531 (-) | True | LOC113537271 |
| TU440780 | other | upstream | 1355112 | 7718263 ~ 7724795 (-) | True | G372086 |
| TU440974 | other | upstream | 1549315 | 7912466 ~ 7916321 (-) | False | fam155a |
| TU441267 | other | upstream | 1957833 | 8320984 ~ 8329026 (-) | False | timmdc1 |
