Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU440643 |
| length | 672 |
| lncRNA type | intronic |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G371964 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 7467789 ~ 7468460 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU440608 | lncRNA | downstream | 52771 | 7410981 ~ 7415018 (-) | True | G371929 |
| TU440604 | lncRNA | downstream | 89251 | 7357311 ~ 7378538 (-) | False | LOC113537388 |
| TU440456 | lncRNA | downstream | 284403 | 7183176 ~ 7183386 (-) | True | G371793 |
| TU440449 | lncRNA | downstream | 314630 | 7151438 ~ 7153159 (-) | True | G371787 |
| TU440274 | lncRNA | downstream | 566446 | 6891766 ~ 6901343 (-) | True | G371634 |
| TU440646 | lncRNA | upstream | 7443 | 7475903 ~ 7476105 (-) | True | G371967 |
| TU440605 | lncRNA | upstream | 9420 | 7477880 ~ 7478230 (-) | False | LOC113537388 |
| TU440719 | lncRNA | upstream | 115804 | 7584264 ~ 7584503 (-) | True | G372034 |
| TU440722 | lncRNA | upstream | 121354 | 7589814 ~ 7590030 (-) | True | G372037 |
| TU440723 | lncRNA | upstream | 125011 | 7593471 ~ 7593948 (-) | True | G372038 |
| XM_026931842.2 | mRNA | downstream | 45989 | 7357271 ~ 7421800 (-) | False | LOC113537388 |
| XM_026932157.2 | mRNA | downstream | 165225 | 7253751 ~ 7302564 (-) | False | mid1 |
| XM_026932159.2 | mRNA | downstream | 165226 | 7253751 ~ 7302563 (-) | False | mid1 |
| XM_026932158.2 | mRNA | downstream | 180992 | 7253751 ~ 7286797 (-) | False | mid1 |
| XM_026932156.2 | mRNA | downstream | 180992 | 7253751 ~ 7286797 (-) | False | mid1 |
| XM_026931620.2 | mRNA | upstream | 443750 | 7912210 ~ 7993096 (-) | True | fam155a |
| XM_026932396.2 | mRNA | upstream | 537912 | 8006372 ~ 8010233 (-) | True | lig4 |
| XM_026931738.2 | mRNA | upstream | 574025 | 8042485 ~ 8054545 (-) | True | irs2a |
| XM_026931731.2 | mRNA | upstream | 593761 | 8062221 ~ 8066451 (-) | True | LOC113537312 |
| XM_026931658.2 | mRNA | upstream | 600942 | 8069402 ~ 8084485 (-) | True | cars2 |
| TU440391 | other | downstream | 399258 | 7058835 ~ 7068531 (-) | True | LOC113537271 |
| XR_004577289.1 | other | downstream | 399322 | 7058835 ~ 7068467 (-) | False | LOC113537271 |
| XR_004577329.1 | other | downstream | 1104586 | 6358639 ~ 6363203 (-) | False | LOC113537742 |
| XR_004577328.1 | other | downstream | 1434396 | 6019687 ~ 6033393 (-) | False | tpp2 |
| XR_003403780.2 | other | downstream | 1515476 | 5942429 ~ 5952313 (-) | False | LOC113537623 |
| TU440780 | other | upstream | 249803 | 7718263 ~ 7724795 (-) | True | G372086 |
| TU440974 | other | upstream | 444006 | 7912466 ~ 7916321 (-) | False | fam155a |
| TU441267 | other | upstream | 852524 | 8320984 ~ 8329026 (-) | False | timmdc1 |
| TU441284 | other | upstream | 961151 | 8429611 ~ 8432424 (-) | False | LOC113537606 |
| XR_004577317.1 | other | upstream | 1122947 | 8591407 ~ 8606840 (-) | True | tsga10 |
