Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU441002 |
| length | 215 |
| lncRNA type | intronic |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G372288 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 7976777 ~ 7976991 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU440867 | lncRNA | downstream | 67225 | 7909124 ~ 7909552 (-) | True | G372168 |
| TU440830 | lncRNA | downstream | 195572 | 7780062 ~ 7781205 (-) | True | G372132 |
| TU440779 | lncRNA | downstream | 245669 | 7730710 ~ 7731108 (-) | True | G372085 |
| TU440790 | lncRNA | downstream | 272389 | 7682685 ~ 7704388 (-) | True | G372095 |
| TU440803 | lncRNA | downstream | 336391 | 7640173 ~ 7640386 (-) | True | G372108 |
| TU441014 | lncRNA | upstream | 11959 | 7988950 ~ 7989198 (-) | True | G372300 |
| TU441021 | lncRNA | upstream | 39114 | 8016105 ~ 8016388 (-) | True | G372307 |
| TU441040 | lncRNA | upstream | 105972 | 8082963 ~ 8084539 (-) | False | cars2 |
| TU441219 | lncRNA | upstream | 225777 | 8202768 ~ 8204224 (-) | True | G372471 |
| TU441222 | lncRNA | upstream | 284444 | 8261435 ~ 8267189 (-) | True | LOC113537489 |
| XM_026931841.2 | mRNA | downstream | 498268 | 7357271 ~ 7478509 (-) | True | LOC113537388 |
| XM_026931842.2 | mRNA | downstream | 554977 | 7357271 ~ 7421800 (-) | False | LOC113537388 |
| XM_026932158.2 | mRNA | downstream | 689980 | 7253751 ~ 7286797 (-) | False | mid1 |
| XM_026932396.2 | mRNA | upstream | 29381 | 8006372 ~ 8010233 (-) | True | lig4 |
| XM_026931738.2 | mRNA | upstream | 65494 | 8042485 ~ 8054545 (-) | True | irs2a |
| XM_026931731.2 | mRNA | upstream | 85230 | 8062221 ~ 8066451 (-) | True | LOC113537312 |
| XM_026931658.2 | mRNA | upstream | 92411 | 8069402 ~ 8084485 (-) | True | cars2 |
| XM_026931725.2 | mRNA | upstream | 110789 | 8087780 ~ 8090097 (-) | True | LOC113537306 |
| TU440974 | other | downstream | 60456 | 7912466 ~ 7916321 (-) | False | fam155a |
| TU440780 | other | downstream | 251982 | 7718263 ~ 7724795 (-) | True | G372086 |
| TU440391 | other | downstream | 908246 | 7058835 ~ 7068531 (-) | True | LOC113537271 |
| XR_004577289.1 | other | downstream | 908310 | 7058835 ~ 7068467 (-) | False | LOC113537271 |
| XR_004577329.1 | other | downstream | 1613574 | 6358639 ~ 6363203 (-) | False | LOC113537742 |
| TU441267 | other | upstream | 343993 | 8320984 ~ 8329026 (-) | False | timmdc1 |
| TU441284 | other | upstream | 452620 | 8429611 ~ 8432424 (-) | False | LOC113537606 |
| XR_004577317.1 | other | upstream | 614416 | 8591407 ~ 8606840 (-) | True | tsga10 |
| TU442201 | other | upstream | 1901852 | 9878843 ~ 9918740 (-) | True | LOC117596103 |
| TU442843 | other | upstream | 2894293 | 10871284 ~ 10872546 (-) | False | lipt1 |
