Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026931976.2 |
| length | 1219 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 3 |
| gene id | LOC113537489 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 8261435 ~ 8267272 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0042989 | sequestering of actin monomers | biological_process |
| GO:0005856 | cytoskeleton | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0003779 | actin binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU441219 | lncRNA | downstream | 60774 | 8202768 ~ 8204224 (-) | True | G372471 |
| TU441040 | lncRNA | downstream | 180459 | 8082963 ~ 8084539 (-) | False | cars2 |
| TU441021 | lncRNA | downstream | 248610 | 8016105 ~ 8016388 (-) | True | G372307 |
| TU441014 | lncRNA | downstream | 275800 | 7988950 ~ 7989198 (-) | True | G372300 |
| TU441002 | lncRNA | downstream | 288007 | 7976777 ~ 7976991 (-) | True | G372288 |
| TU441285 | lncRNA | upstream | 161332 | 8428604 ~ 8444065 (-) | True | G372522 |
| TU441552 | lncRNA | upstream | 507760 | 8775032 ~ 8788141 (-) | True | G372742 |
| XR_003403741.2 | lncRNA | upstream | 696313 | 8963585 ~ 8965621 (-) | False | LOC113537261 |
| XR_003403742.2 | lncRNA | upstream | 696313 | 8963585 ~ 8965428 (-) | True | LOC113537261 |
| TU442113 | lncRNA | upstream | 1492469 | 9759741 ~ 9759949 (-) | True | G373288 |
| XM_026931961.2 | mRNA | downstream | 42455 | 8218639 ~ 8222543 (-) | True | LOC113537479 |
| XM_026931962.2 | mRNA | downstream | 46803 | 8212903 ~ 8218195 (-) | True | rab9a |
| XM_026932222.2 | mRNA | downstream | 107438 | 8150140 ~ 8157560 (-) | True | u2af1 |
| XM_026932402.2 | mRNA | downstream | 116465 | 8132987 ~ 8148533 (-) | True | cbsa |
| XM_026932151.2 | mRNA | downstream | 133815 | 8127561 ~ 8131183 (-) | True | cryaa |
| XM_026931948.2 | mRNA | upstream | 21889 | 8289161 ~ 8291351 (-) | True | zgc:64002 |
| XM_026931946.2 | mRNA | upstream | 27607 | 8294879 ~ 8319843 (-) | False | gk |
| XM_026931947.2 | mRNA | upstream | 27607 | 8294879 ~ 8319843 (-) | False | gk |
| XM_026931945.2 | mRNA | upstream | 27607 | 8294879 ~ 8319843 (-) | True | gk |
| XM_026931720.2 | mRNA | upstream | 53596 | 8320868 ~ 8328976 (-) | True | timmdc1 |
| TU440974 | other | downstream | 348677 | 7912466 ~ 7916321 (-) | False | fam155a |
| TU440780 | other | downstream | 540203 | 7718263 ~ 7724795 (-) | True | G372086 |
| TU440391 | other | downstream | 1196467 | 7058835 ~ 7068531 (-) | True | LOC113537271 |
| XR_004577289.1 | other | downstream | 1196531 | 7058835 ~ 7068467 (-) | False | LOC113537271 |
| XR_004577329.1 | other | downstream | 1901795 | 6358639 ~ 6363203 (-) | False | LOC113537742 |
| TU441267 | other | upstream | 53712 | 8320984 ~ 8329026 (-) | False | timmdc1 |
| TU441284 | other | upstream | 162339 | 8429611 ~ 8432424 (-) | False | LOC113537606 |
| XR_004577317.1 | other | upstream | 324135 | 8591407 ~ 8606840 (-) | True | tsga10 |
| TU442201 | other | upstream | 1611571 | 9878843 ~ 9918740 (-) | True | LOC117596103 |
| TU442843 | other | upstream | 2604012 | 10871284 ~ 10872546 (-) | False | lipt1 |
