Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU442160 |
| length | 719 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G373327 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 9831607 ~ 9832325 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU442150 | lncRNA | downstream | 5914 | 9825461 ~ 9825693 (-) | True | G373317 |
| TU442133 | lncRNA | downstream | 31697 | 9793369 ~ 9799910 (-) | True | G373303 |
| TU442132 | lncRNA | downstream | 31697 | 9793426 ~ 9799910 (-) | False | G373303 |
| TU442149 | lncRNA | downstream | 38986 | 9792282 ~ 9792621 (-) | True | G373316 |
| TU442140 | lncRNA | downstream | 44746 | 9785983 ~ 9786861 (-) | True | G373310 |
| TU442236 | lncRNA | upstream | 130097 | 9962422 ~ 9964543 (-) | True | G373398 |
| TU442515 | lncRNA | upstream | 190212 | 10022537 ~ 10024885 (-) | True | G373629 |
| TU442537 | lncRNA | upstream | 252114 | 10084439 ~ 10084737 (-) | True | G373649 |
| TU442549 | lncRNA | upstream | 294500 | 10126825 ~ 10127603 (-) | True | G373656 |
| TU442548 | lncRNA | upstream | 294858 | 10127183 ~ 10127603 (-) | False | G373656 |
| XM_034299861.1 | mRNA | downstream | 7899 | 9807172 ~ 9823708 (-) | True | sh3pxd2aa |
| XM_026932141.2 | mRNA | downstream | 125781 | 9597014 ~ 9705826 (-) | True | cfap58 |
| XM_026932385.2 | mRNA | downstream | 284350 | 9306733 ~ 9547257 (-) | True | sorcs3 |
| XM_026932386.2 | mRNA | downstream | 442871 | 9306733 ~ 9388736 (-) | False | sorcs3 |
| XM_034299956.1 | mRNA | downstream | 983443 | 8835487 ~ 8848164 (-) | True | caly |
| XM_034299863.1 | mRNA | upstream | 46588 | 9878913 ~ 9918779 (-) | False | LOC117596103 |
| XM_026931714.2 | mRNA | upstream | 87497 | 9919822 ~ 9927977 (-) | True | stn1 |
| XM_034299958.1 | mRNA | upstream | 87497 | 9919822 ~ 9927674 (-) | False | stn1 |
| XM_026931715.2 | mRNA | upstream | 87497 | 9919822 ~ 9927577 (-) | False | stn1 |
| XM_026931646.2 | mRNA | upstream | 99124 | 9931449 ~ 9937173 (-) | True | lrrc58a |
| XR_004577317.1 | other | downstream | 1224767 | 8591407 ~ 8606840 (-) | True | tsga10 |
| TU441284 | other | downstream | 1399183 | 8429611 ~ 8432424 (-) | False | LOC113537606 |
| TU441267 | other | downstream | 1502581 | 8320984 ~ 8329026 (-) | False | timmdc1 |
| TU440974 | other | downstream | 1915286 | 7912466 ~ 7916321 (-) | False | fam155a |
| TU440780 | other | downstream | 2106812 | 7718263 ~ 7724795 (-) | True | G372086 |
| TU442201 | other | upstream | 46518 | 9878843 ~ 9918740 (-) | True | LOC117596103 |
| TU442843 | other | upstream | 1038959 | 10871284 ~ 10872546 (-) | False | lipt1 |
| trnar-ucu_14 | other | upstream | 1640555 | 11472880 ~ 11472971 (-) | True | trnar-ucu_14 |
| TU444510 | other | upstream | 3476713 | 13309038 ~ 13315296 (-) | False | gyg2 |
| trnar-ucu_15 | other | upstream | 3491757 | 13324082 ~ 13324173 (-) | True | trnar-ucu_15 |
