Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034299863.1 |
| length | 888 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 3 |
| gene id | LOC117596103 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 9878843 ~ 9918779 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU442160 | lncRNA | downstream | 46588 | 9831607 ~ 9832325 (-) | True | G373327 |
| TU442150 | lncRNA | downstream | 53220 | 9825461 ~ 9825693 (-) | True | G373317 |
| TU442133 | lncRNA | downstream | 79003 | 9793369 ~ 9799910 (-) | True | G373303 |
| TU442132 | lncRNA | downstream | 79003 | 9793426 ~ 9799910 (-) | False | G373303 |
| TU442149 | lncRNA | downstream | 86292 | 9792282 ~ 9792621 (-) | True | G373316 |
| TU442236 | lncRNA | upstream | 43643 | 9962422 ~ 9964543 (-) | True | G373398 |
| TU442515 | lncRNA | upstream | 103758 | 10022537 ~ 10024885 (-) | True | G373629 |
| TU442537 | lncRNA | upstream | 165660 | 10084439 ~ 10084737 (-) | True | G373649 |
| TU442549 | lncRNA | upstream | 208046 | 10126825 ~ 10127603 (-) | True | G373656 |
| TU442548 | lncRNA | upstream | 208404 | 10127183 ~ 10127603 (-) | False | G373656 |
| XM_034299861.1 | mRNA | downstream | 55205 | 9807172 ~ 9823708 (-) | True | sh3pxd2aa |
| XM_026932141.2 | mRNA | downstream | 173087 | 9597014 ~ 9705826 (-) | True | cfap58 |
| XM_026932385.2 | mRNA | downstream | 331656 | 9306733 ~ 9547257 (-) | True | sorcs3 |
| XM_026932386.2 | mRNA | downstream | 490177 | 9306733 ~ 9388736 (-) | False | sorcs3 |
| XM_034299956.1 | mRNA | downstream | 1030749 | 8835487 ~ 8848164 (-) | True | caly |
| XM_026931714.2 | mRNA | upstream | 1043 | 9919822 ~ 9927977 (-) | True | stn1 |
| XM_034299958.1 | mRNA | upstream | 1043 | 9919822 ~ 9927674 (-) | False | stn1 |
| XM_026931715.2 | mRNA | upstream | 1043 | 9919822 ~ 9927577 (-) | False | stn1 |
| XM_026931646.2 | mRNA | upstream | 12670 | 9931449 ~ 9937173 (-) | True | lrrc58a |
| XM_026932071.2 | mRNA | upstream | 20517 | 9939296 ~ 9961370 (-) | False | fstl1a |
| XR_004577317.1 | other | downstream | 1272073 | 8591407 ~ 8606840 (-) | True | tsga10 |
| TU441284 | other | downstream | 1446489 | 8429611 ~ 8432424 (-) | False | LOC113537606 |
| TU441267 | other | downstream | 1549887 | 8320984 ~ 8329026 (-) | False | timmdc1 |
| TU440974 | other | downstream | 1962592 | 7912466 ~ 7916321 (-) | False | fam155a |
| TU440780 | other | downstream | 2154118 | 7718263 ~ 7724795 (-) | True | G372086 |
| TU442843 | other | upstream | 952505 | 10871284 ~ 10872546 (-) | False | lipt1 |
| trnar-ucu_14 | other | upstream | 1554101 | 11472880 ~ 11472971 (-) | True | trnar-ucu_14 |
| TU444510 | other | upstream | 3390259 | 13309038 ~ 13315296 (-) | False | gyg2 |
| trnar-ucu_15 | other | upstream | 3405303 | 13324082 ~ 13324173 (-) | True | trnar-ucu_15 |
| trnar-ucu_16 | other | upstream | 3406738 | 13325517 ~ 13325608 (-) | True | trnar-ucu_16 |
