Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU442537 |
| length | 217 |
| lncRNA type | inter_gene |
| GC content | 0.51 |
| exon number | 2 |
| gene id | G373649 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 10084439 ~ 10084737 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU442515 | lncRNA | downstream | 59554 | 10022537 ~ 10024885 (-) | True | G373629 |
| TU442236 | lncRNA | downstream | 119896 | 9962422 ~ 9964543 (-) | True | G373398 |
| TU442160 | lncRNA | downstream | 252114 | 9831607 ~ 9832325 (-) | True | G373327 |
| TU442150 | lncRNA | downstream | 258746 | 9825461 ~ 9825693 (-) | True | G373317 |
| TU442133 | lncRNA | downstream | 284529 | 9793369 ~ 9799910 (-) | True | G373303 |
| TU442549 | lncRNA | upstream | 42088 | 10126825 ~ 10127603 (-) | True | G373656 |
| TU442548 | lncRNA | upstream | 42446 | 10127183 ~ 10127603 (-) | False | G373656 |
| TU442550 | lncRNA | upstream | 42446 | 10127183 ~ 10127889 (-) | False | G373656 |
| TU442553 | lncRNA | upstream | 44072 | 10128809 ~ 10129630 (-) | True | G373657 |
| TU442551 | lncRNA | upstream | 44195 | 10128932 ~ 10129414 (-) | False | G373657 |
| XM_034300288.1 | mRNA | downstream | 41184 | 9993701 ~ 10043255 (-) | False | bcl9 |
| XM_034300286.1 | mRNA | downstream | 41184 | 9993701 ~ 10043255 (-) | False | bcl9 |
| XM_026931972.2 | mRNA | downstream | 77596 | 9993701 ~ 10006843 (-) | True | bcl9 |
| XM_026932036.2 | mRNA | downstream | 114280 | 9968451 ~ 9970159 (-) | True | gja8b |
| XM_026932071.2 | mRNA | downstream | 123069 | 9939296 ~ 9961370 (-) | False | fstl1a |
| XM_026932341.2 | mRNA | upstream | 19795 | 10104532 ~ 10116972 (-) | True | morc3b |
| XM_026932342.2 | mRNA | upstream | 19795 | 10104532 ~ 10116933 (-) | False | morc3b |
| XM_026931753.2 | mRNA | upstream | 35805 | 10120542 ~ 10123973 (-) | True | cbr1 |
| XM_026931752.2 | mRNA | upstream | 48475 | 10133212 ~ 10141577 (-) | True | cryzl1 |
| XM_034300007.1 | mRNA | upstream | 132871 | 10217608 ~ 10236158 (-) | False | LOC113537761 |
| TU442201 | other | downstream | 165699 | 9878843 ~ 9918740 (-) | True | LOC117596103 |
| XR_004577317.1 | other | downstream | 1477599 | 8591407 ~ 8606840 (-) | True | tsga10 |
| TU441284 | other | downstream | 1652015 | 8429611 ~ 8432424 (-) | False | LOC113537606 |
| TU441267 | other | downstream | 1755413 | 8320984 ~ 8329026 (-) | False | timmdc1 |
| TU440974 | other | downstream | 2168118 | 7912466 ~ 7916321 (-) | False | fam155a |
| TU442843 | other | upstream | 786547 | 10871284 ~ 10872546 (-) | False | lipt1 |
| trnar-ucu_14 | other | upstream | 1388143 | 11472880 ~ 11472971 (-) | True | trnar-ucu_14 |
| TU444510 | other | upstream | 3224301 | 13309038 ~ 13315296 (-) | False | gyg2 |
| trnar-ucu_15 | other | upstream | 3239345 | 13324082 ~ 13324173 (-) | True | trnar-ucu_15 |
| trnar-ucu_16 | other | upstream | 3240780 | 13325517 ~ 13325608 (-) | True | trnar-ucu_16 |
