Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003403786.2 |
| length | 983 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 3 |
| gene id | LOC113537663 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 10290637 ~ 10292578 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU442626 | lncRNA | downstream | 1270 | 10288380 ~ 10289373 (-) | True | G373719 |
| TU442619 | lncRNA | downstream | 21982 | 10255003 ~ 10268661 (-) | True | G373714 |
| TU442581 | lncRNA | downstream | 43823 | 10191996 ~ 10246820 (-) | False | G373678 |
| TU442578 | lncRNA | downstream | 94934 | 10191996 ~ 10195709 (-) | True | G373678 |
| TU442554 | lncRNA | downstream | 160586 | 10129832 ~ 10130057 (-) | True | G373658 |
| TU442650 | lncRNA | upstream | 129585 | 10422163 ~ 10423467 (-) | False | cab39l |
| TU442685 | lncRNA | upstream | 203058 | 10495636 ~ 10564924 (-) | True | G373762 |
| XR_004577288.1 | lncRNA | upstream | 384054 | 10676632 ~ 10797197 (-) | True | LOC117596123 |
| XR_004577287.1 | lncRNA | upstream | 384054 | 10676632 ~ 10794557 (-) | False | LOC117596123 |
| TU443009 | lncRNA | upstream | 635889 | 10928467 ~ 10929554 (-) | True | G374040 |
| XM_034300007.1 | mRNA | downstream | 54485 | 10217608 ~ 10236158 (-) | False | LOC113537761 |
| XM_026932399.2 | mRNA | downstream | 54485 | 10217608 ~ 10236158 (-) | True | LOC113537761 |
| XM_026931752.2 | mRNA | downstream | 149066 | 10133212 ~ 10141577 (-) | True | cryzl1 |
| XM_026931753.2 | mRNA | downstream | 166670 | 10120542 ~ 10123973 (-) | True | cbr1 |
| XM_026932342.2 | mRNA | downstream | 173710 | 10104532 ~ 10116933 (-) | False | morc3b |
| XM_034300202.1 | mRNA | upstream | 62648 | 10355226 ~ 10359434 (-) | False | LOC113537273 |
| XM_034300203.1 | mRNA | upstream | 62648 | 10355226 ~ 10359434 (-) | False | LOC113537273 |
| XM_026931685.2 | mRNA | upstream | 62648 | 10355226 ~ 10358112 (-) | True | LOC113537273 |
| XM_026931660.2 | mRNA | upstream | 105323 | 10397901 ~ 10399251 (-) | True | arl11 |
| XM_026931674.2 | mRNA | upstream | 129574 | 10422152 ~ 10435367 (-) | True | cab39l |
| TU442201 | other | downstream | 371903 | 9878843 ~ 9918740 (-) | True | LOC117596103 |
| XR_004577317.1 | other | downstream | 1683803 | 8591407 ~ 8606840 (-) | True | tsga10 |
| TU441284 | other | downstream | 1858219 | 8429611 ~ 8432424 (-) | False | LOC113537606 |
| TU441267 | other | downstream | 1961617 | 8320984 ~ 8329026 (-) | False | timmdc1 |
| TU440974 | other | downstream | 2374322 | 7912466 ~ 7916321 (-) | False | fam155a |
| TU442843 | other | upstream | 578706 | 10871284 ~ 10872546 (-) | False | lipt1 |
| trnar-ucu_14 | other | upstream | 1180302 | 11472880 ~ 11472971 (-) | True | trnar-ucu_14 |
| TU444510 | other | upstream | 3016460 | 13309038 ~ 13315296 (-) | False | gyg2 |
| trnar-ucu_15 | other | upstream | 3031504 | 13324082 ~ 13324173 (-) | True | trnar-ucu_15 |
| trnar-ucu_16 | other | upstream | 3032939 | 13325517 ~ 13325608 (-) | True | trnar-ucu_16 |
