Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU444050 |
| length | 219 |
| lncRNA type | inter_gene |
| GC content | 0.31 |
| exon number | 1 |
| gene id | G374963 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 12441321 ~ 12441539 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU444049 | lncRNA | downstream | 3635 | 12437356 ~ 12437686 (-) | True | G374962 |
| TU444048 | lncRNA | downstream | 4101 | 12436772 ~ 12437220 (-) | True | G374961 |
| TU444014 | lncRNA | downstream | 117746 | 12322964 ~ 12323575 (-) | True | G374935 |
| TU443961 | lncRNA | downstream | 282406 | 12158708 ~ 12158915 (-) | True | G374885 |
| TU443791 | lncRNA | downstream | 348585 | 12092512 ~ 12092736 (-) | True | G374727 |
| TU444089 | lncRNA | upstream | 85081 | 12526620 ~ 12526819 (-) | True | G375001 |
| TU444111 | lncRNA | upstream | 119062 | 12560601 ~ 12560825 (-) | True | G375018 |
| TU444126 | lncRNA | upstream | 142906 | 12584445 ~ 12584659 (-) | True | G375027 |
| TU444129 | lncRNA | upstream | 143621 | 12585160 ~ 12585597 (-) | True | G375028 |
| TU444162 | lncRNA | upstream | 183592 | 12625131 ~ 12625619 (-) | False | LOC113537246 |
| XM_026932160.2 | mRNA | downstream | 20766 | 12418468 ~ 12420555 (-) | True | lbx1b |
| XM_026932093.2 | mRNA | downstream | 28290 | 12407030 ~ 12413031 (-) | False | cenpk |
| XM_026932092.2 | mRNA | downstream | 28291 | 12407030 ~ 12413030 (-) | True | cenpk |
| XM_026932132.2 | mRNA | downstream | 41555 | 12350188 ~ 12399766 (-) | False | rims1b |
| XM_026932134.2 | mRNA | downstream | 82836 | 12343194 ~ 12358485 (-) | False | rims1b |
| XM_026932408.2 | mRNA | upstream | 24418 | 12465957 ~ 12471611 (-) | True | inab |
| XM_026932278.2 | mRNA | upstream | 61142 | 12502681 ~ 12535231 (-) | True | cnnm2b |
| XM_026932279.2 | mRNA | upstream | 61143 | 12502682 ~ 12535231 (-) | False | cnnm2b |
| XM_034299940.1 | mRNA | upstream | 94958 | 12536497 ~ 12546423 (-) | True | as3mt |
| XM_026932391.2 | mRNA | upstream | 121465 | 12563004 ~ 12570298 (-) | False | wbp1lb |
| trnar-ucu_14 | other | downstream | 968350 | 11472880 ~ 11472971 (-) | True | trnar-ucu_14 |
| TU442843 | other | downstream | 1568775 | 10871284 ~ 10872546 (-) | False | lipt1 |
| TU442201 | other | downstream | 2522581 | 9878843 ~ 9918740 (-) | True | LOC117596103 |
| XR_004577317.1 | other | downstream | 3834481 | 8591407 ~ 8606840 (-) | True | tsga10 |
| TU441284 | other | downstream | 4008897 | 8429611 ~ 8432424 (-) | False | LOC113537606 |
| TU444510 | other | upstream | 867499 | 13309038 ~ 13315296 (-) | False | gyg2 |
| trnar-ucu_15 | other | upstream | 882543 | 13324082 ~ 13324173 (-) | True | trnar-ucu_15 |
| trnar-ucu_16 | other | upstream | 883978 | 13325517 ~ 13325608 (-) | True | trnar-ucu_16 |
| trnar-ucu_17 | other | upstream | 884454 | 13325993 ~ 13326084 (-) | True | trnar-ucu_17 |
| trnar-ucu_18 | other | upstream | 886513 | 13328052 ~ 13328143 (-) | True | trnar-ucu_18 |
